Geobacter sp. M18: GM18_2659
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Entry
GM18_2659 CDS
T01421
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
geb
Geobacter sp. M18
Pathway
geb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GM18_2659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
geb03019
]
GM18_2659
Enzymes [BR:
geb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GM18_2659
Messenger RNA biogenesis [BR:
geb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GM18_2659
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_11
AAA_19
Utp25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
ADW14109
LinkDB
All DBs
Position
3172511..3173944
Genome browser
AA seq
477 aa
AA seq
DB search
MKFTELQLPDLVLKGIEETGFTDCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIF
TRLLNQQKTGAEHHPRALILAPTRELVVQIEKDAQTLGKYTGFNIQAIYGGVDYMKQRDA
LKAGADIVIGTPGRLIDYLKQKVYSLKDVEALVIDEADRMFDMGFIADLRFILRRLPTYD
KRQNLLFSATLNTRVMELAYEFMNMPEKVSVTPEQMTAERVEQVLYHASRKEKFPLLLGL
LRKMGMERTMIFVNTKREAEYLQDRLNANEFPCKVISGDVEQRKRMKILSDFKAGILPIM
IATDVASRGIHIEGVSHVINYDLPQDCEDYVHRIGRTARAGAEGMAISLADEDGAFYIEA
IQDFIKQKIPTEWAEDDMFVHDYKRTARPPRRSDDKPGGRGGKPAGRGAKPGEREKPRER
RGKSGGEKKKEAGEPATAAAEVREVQASGEAGAGEAAPAKRKRPRRRKPKTEQPEQP
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaccgagttgcagcttccggacctggtcctcaaagggatcgaagaaaccggt
ttcaccgactgcacaccgatacaggaaaaggcactgccgctggccctcacgggcaaggac
gtggcaggacaggctcagaccggtaccggcaaaacagccaccttcctgatctccatcttc
acccgcctgctgaaccagcagaaaaccggcgccgagcatcacccccgcgcgctgatcctc
gcccccacccgcgaactggtagtccagatcgagaaggacgcccagacgctggggaaatac
accggcttcaacatccaggcgatctacggcggcgtagactacatgaagcagcgcgacgcg
ctgaaggcgggcgccgacatcgtgatcggcacgccggggcgcctgatcgactacctgaag
cagaaggtctattcgctgaaggacgtcgaggcgctggtcatcgacgaggcggaccggatg
ttcgacatgggcttcatcgccgacctgcgcttcatcctgagacgcctgccgacctacgac
aagcgccagaacctcctcttctccgccaccctgaacacccgcgtgatggagctcgcctac
gagttcatgaacatgcctgagaaggtctccgtgacgccggagcagatgacggccgagcgc
gtcgaacaggtgctgtaccacgcctcccgcaaggagaagttcccgctgctgctggggctg
ctcaggaagatgggcatggagcgcaccatgatcttcgtgaacaccaagcgcgaggcggag
tacctgcaggaccgcctgaacgccaacgagttcccctgcaaggtgatttccggcgacgtg
gagcagagaaagaggatgaagatcctctccgacttcaaggcggggatactcccgatcatg
atcgccaccgatgtcgcctcgcgcggcatccacatcgaaggggtctcgcacgtcatcaac
tacgacctgccgcaggactgcgaggattacgtgcacaggatcggccgcaccgcccgtgcc
ggcgccgaggggatggcgatctcgctggccgacgaggacggcgccttctacatcgaggcg
atccaggacttcatcaagcagaagatcccgaccgagtgggccgaggacgacatgttcgtc
cacgactacaaaaggaccgccaggcccccccgccgcagcgacgacaagcccggaggcagg
ggaggcaaacccgccggcaggggggccaagcccggcgagcgggagaaacctcgtgagcgg
cgcggaaagtccgggggcgagaagaagaaggaagcaggcgaaccggcaaccgccgcagcc
gaggtcagggaagtccaggcctccggcgaggcaggcgcaggcgaggcggcaccggccaag
cgcaagcgtccgcgccgtcgcaagccgaagaccgaacagcccgagcagccgtga
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integrated database retrieval system
