Geobacter sp. M18: GM18_3325
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Entry
GM18_3325 CDS
T01421
Name
(GenBank) Collagen triple helix repeat-containing protein
Organism
geb
Geobacter sp. M18
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Sialidase-like_CBM
Motif
Other DBs
NCBI-ProteinID:
ADW14761
UniProt:
E8WKT0
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Position
complement(3905366..3909451)
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AA seq
1361 aa
AA seq
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MKKQSIILLAVISVFASLWSHAADTTPSLSLQKMFQASPKEAAPSGATRMMTVRGEVIRQ
ISFTSAQATVAVGTVTTGAAGSPVEITNVGSPNRAVFEFRIPKGDKGDTGATGVAGIQGE
QGIQGLQGPAGADGAQGPPGPKGDPGDTGPAGTTDYNALQNKPTLGTAAAANIVNSTFAA
YTARPVSAAKVKELNDRKLDFSGSSAGLKGVYTHVVFANLSSSGARTNYPAKVRLFKGAG
TSGVLDGVLQVYCGGNIDSSFAAVRFLAADGSTAYQYRRYNVVEGVSADFIVSITSIPAT
GKVPLIIRTRDGGLPTDSTDAVVSEILPDGFKRYGGTGTLELYSGLEQTVIYEDGKFRKW
YSKPIIVPGSSRLNGASGDWTHLEPGYSGPMPNNYPWDRMDIYYEESVDGINWTNNGYCV
TTGARSNVRKGPDGLYHMLAFHFDRIYPRRKIDYYTSSTGMPNTWSLVKAAAIDMTFAQG
EAGNNTFWFEDGQWNVLVEANYNAVNPAVSWVGFYFTGPSLDSLTLVQPDPVILPPSGNM
SGSVGEIQLQKIGGKYVIFGHDSDVGNLSFPTSNTMYSADSILGPWSRQWWALKLTDTFN
GRSDMPTNADSQYADPTVIEVDGRTYMYYENIWYERYDIPTMSLATWDAPLSHILDTTRT
KAKGDDLVAEGWVFDDGYGEVRPSNSDFPTTFFRKVSTDLSRMPAAIKVKTDATHAIRAR
KSLAITGENVFAIDVKSEQTDKRVDFRLDRDANNSILCGVWFDTDGYIKYYNGTATASAQ
AYSASTYYKVEIVQKASSWDLAIDGITIATSIPYYAAGAPSHLKIEQPAGAISYIGLVLV
TPYSDPVTTPKWVVSSSTQGPQGPQGPVGAQGPQGAQGAQGAQGPQGIPGTNGNDGINGL
SAYEVAIGNGFLGTEAEWLESLHGADGAQGIQGIDGPQGIQGPKGDTGDQGLQGIQGIQG
EQGLPGADGSPDTQQQILTKLATATDGATVALTQGGTESPIVPKATLTDSSGIARFTLSP
EQLVLLKTADNGTSYHLRVDSDGGFAAGAQFTAYTPASSGASTLLGRRARTSLAFPSAAQ
NNDQLMRIQGQGHGATGWNANASATIDFKATENFSDTAQGARISIGTMKNGTVTRTERIS
IGNNIGLFNQNTFDATADGVLAIKNATTAPAAGLADATQVYSSDIGGVAGKAGIHVKSED
GSVTSIGRDVTSPGQFVSTIATGTPPLVVASTTEVANLKSADSGKLNGQTASYYAKANGQ
THAQGVSSTLDLDANDGFRLSYSSGTISLTVNNLVDGKYFDIEIVSMSSALTLANPLFTG
AIFPNGVPTTVDANTRTHITCKGYGTNKAACYTLSESKIWP
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacagtcgatcatactgctggccgtcatatccgtctttgcatccctctggagc
catgccgccgacaccaccccgtctttgagcctccagaagatgttccaggcatcccccaag
gaagccgcccccagtggcgccacccggatgatgaccgtccggggggaagtgattcggcag
atcagcttcacctccgcgcaagccaccgtagcagtcggcaccgtcaccaccggagccgcc
ggatctcccgtcgagatcaccaacgtcggctcccccaaccgagcagtgttcgagttcagg
atccccaaaggcgacaagggcgacaccggcgccaccggcgtcgccggcatccagggcgag
caaggtattcagggccttcaaggtccggctggcgcagatggtgcgcagggcccccctggt
cccaaaggtgacccaggcgacaccggcccggccggtaccaccgactataacgcgctgcag
aacaaacccaccctgggcaccgcagcagccgccaacatcgtgaactccacgtttgcggcc
tatacagccaggcccgtgagtgcagccaaggtaaaggaactaaacgataggaagctcgat
ttctccggtagcagtgcagggcttaaaggcgtgtacacgcacgtcgtttttgccaaccta
tccagcagtggagcgcgcactaactatcccgcaaaagtgaggctgttcaaaggcgccggt
acaagtggcgtattggacggagtactgcaggtctactgtggtgggaacatagattccagt
tttgccgcagtgcgcttcttggccgctgacgggtcgactgcgtaccagtatcggcgctac
aacgtcgtggaaggcgtgagcgccgatttcatcgtcagcatcaccagcattccggccacc
ggcaaggtgcctctcatcatcagaacacgggacggcggattgccgacagactccaccgat
gccgtagtgtccgagatcctcccggatgggttcaagcgatacggcggaacagggacgctg
gaactttacagcggcctcgaacagaccgtgatctacgaggacggcaaattccgcaagtgg
tatagcaagccgatcatagtcccgggttcctcccgcttgaacggtgcaagcggcgattgg
acgcatttggagccggggtattctgggcctatgccaaacaactacccctgggaccgaatg
gacatctactacgaagaatcggtcgatggcatcaactggaccaacaacggttactgcgta
acaacaggagctcgcagcaacgtgagaaagggccctgacgggctctaccacatgttggcg
tttcacttcgatcggatatatccgcgccgcaagatcgactattacacgtcttcgacaggc
atgccgaacacctggagtcttgtaaaagccgccgccatcgacatgactttcgcccagggg
gaggcgggcaacaatactttctggtttgaagacggtcaatggaacgtgcttgtcgaggca
aattacaacgccgttaaccctgcggtcagctgggtgggcttctattttaccggcccttct
ctcgatagcctgacgttggtacaacccgatccggtcatcctcccgccgtccggcaatatg
tccggttccgtaggcgaaatccagctccaaaagatcggcggcaagtatgtgatctttggt
cacgactccgacgtggggaacctgtcgttcccaacatctaacacgatgtattccgccgac
agcatcttggggccgtggagccgccagtggtgggctctcaaactgacggatacgttcaac
ggcagatcggacatgccgacgaatgcagactcccagtacgccgacccgactgtcattgaa
gtcgatgggcgaacctacatgtactacgaaaatatctggtacgagcggtacgacatcccc
accatgtctctcgcaacctgggatgctccgctgtcccacatcctggacacgacacgcacc
aaggcaaagggcgacgacctggttgcggagggatgggtatttgatgacggatatggcgag
gtgaggccgtcaaactccgatttccctaccacattttttcgcaaggtttcgaccgacctt
tcccggatgcccgccgcgatcaaggtcaagaccgatgccacgcacgccatcagggcacgt
aaaagcctcgcgatcactggcgagaacgtctttgctattgatgtgaaatccgaacaaacg
gacaaacgggtagattttcgtttagaccgggatgcaaacaactccatcctgtgtggtgtc
tggttcgacacggacggatacatcaagtactacaacggcaccgctaccgcttccgcacaa
gcttactccgcgtcgacttactacaaagttgagattgtgcaaaaggcatcttcctgggac
ctggcgatagacggcatcacgatagctacctcaataccctactacgctgcgggggcgcct
tcgcacctcaaaatagagcagcccgccggcgccataagctacataggtctggttctggtc
acgccttactcagaccctgtgaccacccctaaatgggttgtctcgtcatcgactcaagga
ccgcaaggaccacaagggccggtaggggcacaggggccacagggggcacagggggcacag
ggggcacaggggccgcagggtatccccggaacaaacgggaatgacggaatcaacgggctt
tccgcgtatgaagttgccataggcaatgggttcctgggcacagaagccgaatggctcgaa
tctctgcatggtgccgatggtgcgcaaggcatccaaggcatcgacgggccgcaaggcatc
caaggacctaaaggcgacacgggagatcaaggtctccaaggcattcagggtatccaaggt
gagcagggactcccgggtgcagacggatcgcccgacacacagcagcagatcctcaccaag
ctcgctacagccacggacggtgccacagtagcgctcacccaaggggggactgaatcaccc
atcgtccccaaggcaactctgaccgatagtagcgggatagcccggtttactctgtcgccg
gagcaattggttctgctcaaaaccgcagacaacggtacctcgtatcatttgcgagtcgac
tctgacggcggctttgcagccggagcccagttcaccgcatatactccggcttcgtctggg
gcgtccacactgctaggccgaagagcaaggacaagcctcgcgttcccctcagcggcccag
aacaacgatcagctgatgcgaatccagggccaagggcacggagctacaggctggaatgcc
aacgcgtcagcgacgatagatttcaaggcgaccgagaatttttcagacaccgcgcagggc
gcgcgcatatcgatcgggaccatgaaaaacgggaccgttaccagaaccgaaaggatcagc
atcggcaataacatcggattgttcaaccagaacacgttcgatgccacggctgatggtgtt
ctggccattaagaatgccaccaccgctcccgctgccggtcttgcagacgcgacgcaggtg
tactcatctgatatcggaggtgtggcaggaaaagcgggtatccacgtaaagagtgaagat
gggagtgtcaccagcattggccgcgacgtgacatccccagggcagtttgtctcgaccatc
gccactggcacccctccgcttgtcgtcgcatcgaccaccgaagtggccaacctgaaaagc
gccgactccggcaagctgaacggccagactgccagctactatgccaaggccaacggccag
acgcacgctcagggagttagctccaccctagacctggatgcaaacgacggcttccgcctc
tcctattcgagcggcacaatttctctcacggtcaacaatctggtggacggcaaatacttt
gacatcgagattgtctccatgtcttccgccctcaccctggcaaacccactgttcaccggg
gcgatattccccaacggggtgccaaccaccgtggacgccaacactcggacccacatcaca
tgcaaagggtatggcaccaacaaagccgcctgctacaccctctcggagtcaaagatatgg
ccataa
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