Geobacter sp. M18: GM18_4197
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Entry
GM18_4197 CDS
T01421
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
geb
Geobacter sp. M18
Pathway
geb02020
Two-component system
geb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GM18_4197
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GM18_4197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
geb03021
]
GM18_4197
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
geb02035
]
GM18_4197
Transcription machinery [BR:
geb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GM18_4197
Bacterial motility proteins [BR:
geb02035
]
Flagellar system
Flagellar assembly proteins
Stator
GM18_4197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HrpB7
DUF7096
HJURP_C
Motif
Other DBs
NCBI-ProteinID:
ADW15611
LinkDB
All DBs
Position
complement(4935598..4936350)
Genome browser
AA seq
250 aa
AA seq
DB search
MNCLLKAYEHEAQRGVPMSRDELVVSHLPLVKFIVDRIASSLPPHLDRDDLRSAAVIGLI
SAAERFDPSRGVQFKTFAEQRIRGTIMDELRAQDWLTRSLRDKFKKLEKEFSQLEQRLGR
NPSSDEVATAMGLELKDYFRLLEEIHLLSFVSLDDAWHDEDGAPFGLLDVLEDKGTESPQ
NQLIARQTVERLAEAIDTLPEKERIVITLYYYEELNLKEIGAVLDLTESRISQLHSQAII
RLRGKMKRVA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtcttcttaaggcgtacgagcatgaggcgcaacgcggtgtcccgatgagcagg
gacgaactggtggtcagccacctcccgctggttaagttcattgtagacaggatcgcctcg
tcacttcccccgcacctggaccgggacgatttgaggagcgccgccgtgatcggtctgatc
tcagccgcggaacgcttcgatcccagccgtggggtacagttcaagaccttcgcggagcag
cgcatccggggcaccatcatggacgagctgcgggcccaggactggctcaccaggagcctc
agggacaagttcaagaagctggagaaggagttctcgcagctcgagcagcgcctggggaga
aacccctccagcgacgaagtggccaccgccatgggactcgaactcaaggactacttcagg
cttttggaggagatccacctcctctccttcgtctccctggacgacgcctggcacgacgag
gacggcgctcccttcggccttctggacgtcctggaggacaaggggaccgagagcccgcag
aaccagctgatcgcccgccagaccgtggagcggctcgccgaggcgatcgacaccctcccc
gagaaggagcgcatcgtcatcacgctctactactacgaggagctgaacctgaaggagatc
ggcgccgtgctcgatctcaccgagtcgcgcatctcgcagctgcacagccaggccatcatc
aggctgcgcggcaagatgaagcgcgtggcctaa
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