Geobacter sp. 60473: GEO60473_00960
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Entry
GEO60473_00960 CDS
T10337
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
gec Geobacter sp. 60473
Pathway
gec02024
Quorum sensing
gec03060
Protein export
gec03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
gec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
GEO60473_00960 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GEO60473_00960 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GEO60473_00960 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gec02044
]
GEO60473_00960 (ffh)
Enzymes [BR:
gec01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
GEO60473_00960 (ffh)
Secretion system [BR:
gec02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
GEO60473_00960 (ffh)
Eukaryotic Sec-SRP protein
GEO60473_00960 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
TctA
ATP_bind_1
AAA_33
AAA_30
AAA_16
DUF6261
ParBc
AAA_18
RMI1_C
Thymidylate_kin
AAA_24
6PF2K
Motif
Other DBs
NCBI-ProteinID:
BET57056
UniProt:
A0AA86JAL5
LinkDB
All DBs
Position
98981..100339
Genome browser
AA seq
452 aa
AA seq
DB search
MLENLSDKLDVLFKKLRGQGVMSEENIKEALREVRLVLLEADVNFKVVKDFVEKVRVRAV
GTQVLQSLTPGQQVIKIVQEELVALMGGGEDNSLDLAAKPPVPIMMVGLQGAGKTTSCGK
LARLLKAQRRRPLLVPADVYRPAAIEQLKTLGRQLSVEVFDSRADQDPVDICRDALRYAT
LNGFDVVILDTAGRHQIDEYLMNELVRIKEAAEPREILFVADAMTGQEAVNVASGFNDRL
DITGVVLTKLDGDAKGGAALSIRAVTGKPVKLVGVGEKLDALEVFHADRLVSRILGMGDI
LTLVEKAQATFDSQEAERLQQKLKKSQFDLEDFRNQLQQIKKMGSIESILGMIPGVGKAM
KQLQGAQPSERELKRIEAIIGSMTPAERANHAIINGSRRLRIAKGSGTTVQEVNQLLKRF
TEAQKMMKQLQKLGPKGLMRGMKGMGKGMFPF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaaatctttccgacaagcttgacgtcctctttaaaaaactccgcggtcaggga
gtgatgagcgaggagaatatcaaggaggcgctccgcgaggtgcggctcgttcttcttgag
gccgacgtgaacttcaaggtcgtcaaggactttgtcgaaaaggttcgtgtccgtgccgtc
ggcacccaggtgctccagagtctcacgccggggcagcaggtcatcaagattgttcaggaa
gagcttgtggccctcatgggcgggggcgaggacaacagtctcgatctggctgcaaagccg
ccggtccccatcatgatggtaggcctccagggggccggcaagaccacctcctgcggcaag
ctggcccggctgctcaaggcgcagcggcgtcgaccgctcctggtgcctgccgacgtctac
cggcctgcggccattgagcagctgaagaccctcggacggcagctgtccgtggaagtgttc
gattcccgggcggatcaggacccggtcgatatctgtcgcgacgcgctccgttacgcaact
ctcaacggcttcgacgtggtcattcttgacaccgccggccgccaccagatcgacgagtat
ctcatgaatgagctcgtcaggatcaaggaggcggcggagccgcgggaaatcctcttcgtc
gccgacgccatgaccggccaggaagcggtcaatgtggccagcggcttcaatgaccggctc
gatattaccggcgtggtcctcaccaagcttgacggcgatgcaaaggggggggctgcgctc
tcaatccgggcggtgaccggcaagccggtgaaacttgtaggggtcggcgaaaagcttgac
gccctggaagttttccatgcggatcgtctggtgtcgcgcatccttggaatgggtgatatt
cttacccttgtggagaaggcccaggcgaccttcgactctcaggaggccgaacggcttcag
cagaagctcaagaaaagccagttcgatctggaggatttccgcaaccagctgcaacagatc
aagaagatgggctccattgagtcgattctcggcatgattccgggggtcggcaaggccatg
aagcaactgcagggcgctcagccttccgagcgagagctcaagcggatcgaggcgatcatc
ggctccatgacccctgccgagcgtgcgaaccacgcgatcatcaacggcagcaggcggctg
cgcatcgccaaggggagcggcaccaccgttcaggaggtgaaccagctccttaagcgtttc
accgaggcgcagaaaatgatgaagcagctccagaaactcggaccaaaggggctgatgcgc
ggcatgaaaggaatgggcaaggggatgttccccttttag
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