Geobacter sp. 60473: GEO60473_05520
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Entry
GEO60473_05520 CDS
T10337
Name
(GenBank) Ni/Fe hydrogenase subunit alpha
KO
K14126
F420-non-reducing hydrogenase large subunit [EC:1.12.99.-
1.8.98.5
]
Organism
gec Geobacter sp. 60473
Pathway
gec00680
Methane metabolism
gec01100
Metabolic pathways
gec01120
Microbial metabolism in diverse environments
gec01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gec00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
GEO60473_05520
Enzymes [BR:
gec01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.98 With other, known, physiological acceptors
1.8.98.5 H2:CoB-CoM heterodisulfide,ferredoxin reductase
GEO60473_05520
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GFIT
Motif
Pfam:
NiFeSe_Hases
Motif
Other DBs
NCBI-ProteinID:
BET57512
UniProt:
A0AA86JJD1
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Position
complement(624088..625509)
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AA seq
473 aa
AA seq
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MNKTITIDPVTRIEGHARVFIDLDDAGGLTAAGLVVNELRGFEKILTGMDADRMPLVTAR
ICGVCPTAHHLAATNALDNAAGVEPPPAAKLLRELMYMGHVIHSHCLSLFVLQGPDLVLG
LDADPAVRNVVGVVQAAPDIAKKALQCRSIGQKINELVGGRGTHPVTSVAGGIAFVLDAD
RERQLNAWINEARDLVLELAPVVKQLLMKMLDTHPAMLQQWVAPAWSVGTVKADGTLALV
NGEIRAVDEGGALKARFPSADYDSYMSESAVEFSYMKQVSFVDGDNRHDYRVGPLARLNV
SERYGTPLADREREEFIRTVGRPCHANALQPWARLIELLHCTERAGEIMADPAIHGETRV
PVTFSGGRGVGHVEAPRGTLIHDYEIDENGIVRAANLIVATQQNYALINAMIAQAATSHV
INRPDDQALLNAVEFGIRCYDPCLSCATHALGAMPLEIVVNRAARPRVIRRNC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaccataaccattgatcccgtcacccgcatcgaggggcacgcgcgggtcttc
atcgacctggacgatgcgggtgggctcacggccgcggggctcgtggtgaacgagctgcgc
ggtttcgagaagatcctgaccggcatggacgcggaccggatgcccctggtcacggcccgc
atctgcggggtctgccccacggcccaccacctggccgccaccaacgccctggacaatgcc
gcgggcgtggagccgccaccggccgcgaaactgctgcgcgaactcatgtacatggggcac
gtgatccactcccactgcctctccctgttcgtgctgcagggccccgacctggtcctgggc
ctcgacgccgaccccgccgtccgcaacgtggtcggggtggtgcaggcggccccggatatc
gccaagaaggccctccagtgccgctccatcggccagaagatcaacgagctggtcggcggg
cggggcacccaccccgtcacctcggtggccggcgggatcgccttcgtgctcgacgccgac
cgggagcggcagctcaacgcctggatcaacgaggcccgcgaccttgtgctggaactggcg
cccgtggtgaagcagctcctgatgaagatgctcgacacccatccggccatgctgcagcag
tgggtcgccccggcctggagcgtcggcacggtcaaggccgacggcaccctggccctggta
aacggcgagatccgggccgtggatgagggcggcgccctgaaggcccggttcccctcggcc
gattacgattcgtacatgtccgagtcggcggtggagttctcctacatgaagcaggtttcc
tttgtggacggggacaatcgccacgactaccgggtgggccccctggcccggctcaacgtc
tccgagcgctacggcacccccctggcggaccgggagcgggaagagttcatccgtaccgtg
ggccgtccctgccacgccaatgcgctccagccctgggcccgtctcatcgagctcctccac
tgcaccgagcgggccggggaaatcatggccgatccggccatccacggcgagacccgggtg
ccggtcaccttctccggcggccggggcgtggggcacgtggaggcgccccggggcaccctg
atccacgactatgaaatcgacgagaacggcattgtccgggcggcgaacctgatcgtggcg
acccagcagaattacgccctgatcaacgccatgatcgcccaggccgccacatcccacgtc
atcaaccgccccgacgaccaggcgctgctcaatgcggttgagttcggcatccgctgctac
gacccctgcctctcctgcgccacccatgccctgggcgccatgcccctggaaatcgtcgtg
aaccgtgccgcaaggccccgcgtcatccggaggaactgctga
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