Geobacter sp. 60473: GEO60473_09100
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Entry
GEO60473_09100 CDS
T10337
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
gec Geobacter sp. 60473
Pathway
gec02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GEO60473_09100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
gec02022
]
GEO60473_09100
02035 Bacterial motility proteins [BR:
gec02035
]
GEO60473_09100
Two-component system [BR:
gec02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
GEO60473_09100
Bacterial motility proteins [BR:
gec02035
]
Pilus system
Twitching motility proteins
GEO60473_09100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA
Mg_chelatase
IstB_IS21
AAA_16
bpMoxR
PDE8A_N
AAA_2
ATPase
TIP49
AAA_19
DUF815
nSTAND3
Torsin
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BET57870
LinkDB
All DBs
Position
1029582..1030958
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AA seq
458 aa
AA seq
DB search
MEIHVLVVDDELSMREFLAILLDREGYTVDQAASAEEALVCLERKTYDLVISDVKMPGLD
GITLLGHIKEMTPDTAVLLMTAFSTAEQAVEAMKLGAYDYIAKPFKVEEVKILARNALEK
RDLKRENLRLRQEVQERYSFSGLIGKSKKMREVYSLIEKVAPSTANVLILGESGTGKELV
ARAIHYNSQRKGKPFVAVNCGAIPETLMESEFFGHKKGAFTGAVGDRAGLFEQAEGGTLF
LDEIGEVPLQLQAKLLRAIQEKEFRRVGGTLDQKADVRLVAASNRDLEEQVKEGSFREDL
FYRLNVVQVKMPPLRERGDDIPILVEHFYKKYVQPPYSDRIITQGALKLLMSYGFPGNVR
ELENLVERCSVLGNREISEECLPPQLHAGKRPECGAVTECELPEEGMDLEAYLDGIEKRI
LLQALERSGGVKKKAAELLKLTFRSFRYRLAKFGMDEE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcatgttctcgtagtggacgatgagctgagcatgcgcgaattcctcgccatc
ctgctcgaccgggagggctataccgttgaccaggccgccagcgccgaagaggcgttggtc
tgtcttgaacgcaagacgtatgatctggtcatctccgacgtaaagatgccggggctcgat
ggcattaccctcctgggccacatcaaggaaatgacgcccgacacggccgtcctcctcatg
accgccttttccactgccgagcaggccgtggaggccatgaagctcggggcgtacgactac
atcgccaagcccttcaaggtagaagaggtcaagatcctcgcccgtaacgccctggaaaag
agagatctcaagagggagaacctgcggcttcgccaggaggtgcaggagcggtacagcttc
agtggcctgatcggcaagagcaagaagatgcgtgaggtctactccctgatcgaaaaggtg
gcgccgagcaccgcgaatgttctcattctcggtgagagcggcaccggcaaggaactggtg
gcccgcgccatccactacaacagccaacgcaagggaaaaccctttgtggcggtcaactgc
ggcgccattcccgaaaccctcatggagagcgaattcttcggtcacaaaaagggggcgttc
accggcgccgttggtgaccgggcgggtctcttcgagcaggccgagggtggtaccctgttc
ctggacgaaatcggagaagtgccgctccagcttcaggccaaactcttgcgggccatccaa
gaaaaagaattccgcagggtagggggaacccttgaccagaaggccgacgtgcggctggtg
gccgcctccaatcgcgatttggaagagcaggtgaaggaggggagtttccgggaagatctc
ttttatcgcctcaacgtggtacaggtcaaaatgcccccactccgtgagcgtggagatgat
atccccatcctggttgagcacttttacaaaaagtacgtccagcccccctacagtgaccgc
atcataacccagggggcactgaagctcctcatgtcatacggctttccgggcaacgtccgc
gaactggagaacctggtcgaacgctgctctgtgctcggtaatcgcgagatttcggaagaa
tgtctcccgccgcagctccacgcgggcaagcggcctgaatgtggcgcggtcaccgagtgt
gaactaccggaagagggcatggatctcgaagcctacctggacggcattgaaaagcgaatt
ctgcttcaggcgttggaacgcagcggaggtgtgaaaaagaaagcggccgaacttttgaag
ctaacgttccggtctttccgttatcgcttggcaaaattcggcatggatgaggagtga
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