Geobacter sp. 60473: GEO60473_19880
Help
Entry
GEO60473_19880 CDS
T10337
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gec Geobacter sp. 60473
Pathway
gec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GEO60473_19880 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gec03019
]
GEO60473_19880 (recQ)
03400 DNA repair and recombination proteins [BR:
gec03400
]
GEO60473_19880 (recQ)
Enzymes [BR:
gec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GEO60473_19880 (recQ)
Messenger RNA biogenesis [BR:
gec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GEO60473_19880 (recQ)
DNA repair and recombination proteins [BR:
gec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GEO60473_19880 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HHH
Motif
Other DBs
NCBI-ProteinID:
BET58948
UniProt:
A0AA86J4D6
LinkDB
All DBs
Position
complement(2244737..2246548)
Genome browser
AA seq
603 aa
AA seq
DB search
MGHETLAVLRTVFGYRSFRPFQEEIVDRVARGGDTFVLMPTGGGKSLCYQIPSLVRPGVG
IVISPLISLMKDQVDALRENGVAAACYNSTLGERESRRVLARLHGGELDLLYVAPERLMT
DAFLERLREIPIALFAVDEAHCVSQWGHDFRPEYVELGRLRGLFPTVPMIALTATADAQT
RGDIVTRLGLRDAEMFVTGFDRPNIRYSVLEKQKPFRQLEEFLATRPREAGIVYCLSRKR
VEEVAEKLRAAGVEAGAYHAGLADAERSRVQEAFLRDDIRVVVATVAFGMGIDKPNVRFV
VHYDLPKNIESYYQETGRAGRDGLPAEALLLFGYGDIPVSRSLIESGGNPEQVRIELHKL
NAMVGFAEALVCRRRALLGYFGERLEEPCGNCDLCLAPPETFDATEEARKALSCVYRVGQ
RFGVGHVIDVLRGSRSERILALGHDRLSTYGIGASLAAEAWGSIIRQLIHRGYLEQDLAN
YSVLKLTPAARPLLRGEESLVLAKPRLRMAAPKKEKAPRRPGAATPAERGEELFQELRAL
RKRLADDQQVPPYIIFSDATLAEMASLRPTTPEELLRVNGVGERKLGRYGAPFLEAIRSH
GAG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtggggcacgaaaccctcgccgtcctccgcacggtcttcgggtaccggtccttccgcccg
ttccaggaggagatcgttgaccgggtggcgcgcgggggcgatacgttcgtcctgatgccc
accggcggcggcaagtccctctgttaccagatcccctccctggtgcggcccggcgtgggg
atcgtgatttcccccctcatttccctcatgaaggaccaggtggatgccctgcgcgagaac
ggcgtggcagcggcctgctacaactcgaccctgggcgagcgggagtcgcgccgggtgctc
gcccggctccacggcggcgagctggaccttctctacgtggccccggaacggctcatgacc
gatgcctttctggagcggctacgggagatacccatcgcgctcttcgccgttgatgaggcc
cactgcgtctcccagtgggggcacgatttccgtcccgagtacgtggagctgggacggttg
cgggggctgttcccgaccgtgccgatgatcgccctgaccgccaccgccgacgcccagacc
cgaggcgacatcgtgacgcggctggggcttcgggacgccgagatgttcgtgaccggcttc
gaccggcccaatatccgctacagcgttctggaaaagcagaagccgttccggcaactggag
gagttcctggcgacgcgcccccgggaggcgggcattgtctactgcctttcccgcaagcgg
gtggaagaagtggcggagaagctccgggcggccggggtggaggcgggggcctatcacgcc
gggcttgccgacgcggaacggagccgggtccaggaggcgttcctgcgggacgacatccgg
gtggtggtggccacggtggccttcggcatggggatcgacaagcccaacgtccggtttgta
gtccactacgacctgcccaagaacatcgagagttactaccaggaaaccgggcgggccggc
cgcgacggtctcccggccgaggcgctgctcctcttcggctacggcgacatcccggtctcc
cgctccctcatcgagtcgggcgggaaccccgagcaggtgcggatcgagctgcacaagctg
aacgcgatggtggggttcgccgaggcactcgtctgccggcgccgggcactgctcggctac
ttcggcgagcggctggaggaaccttgtggcaactgcgacctctgtctggctccgcccgaa
accttcgatgccaccgaagaggcccgcaaggccctttcctgcgtctaccgggtggggcag
cgcttcggcgtggggcacgtgatcgatgtcctgcgcggttcgcggagtgaacgcatcctg
gccctgggccacgaccggctctcgacctacggcatcggcgccagcctggcggccgaggcc
tgggggagcatcatccgccagctcatccaccggggatacctggagcaggacctggccaac
tactcggtgctgaagctgacccctgcggcccggccgctgctgcggggcgaggagagcctg
gtcctggcgaagccgcggctgcggatggccgctccgaaaaaggaaaaggccccccgccgg
ccgggagccgccacgccggcggagcggggcgaggagctcttccaggagctgcgggcgctc
cgcaaacggttggcggatgaccagcaggttcctccgtatatcatcttcagcgatgcgacc
ctggccgagatggcgtcgctgcggccgaccacgccggaagaacttttgcgggtgaacggg
gtgggcgagcggaagctcggccgctacggcgccccgttcctggaggcgatccggagccat
ggcgccggttga
DBGET
integrated database retrieval system
