Geobacter sp. 60473: GEO60473_20190
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Entry
GEO60473_20190 CDS
T10337
Name
(GenBank) C40 family peptidase
KO
K19224
peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
Organism
gec Geobacter sp. 60473
Brite
KEGG Orthology (KO) [BR:
gec00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gec01002
]
GEO60473_20190
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gec01011
]
GEO60473_20190
Peptidases and inhibitors [BR:
gec01002
]
Cysteine peptidases
Family C40
GEO60473_20190
Peptidoglycan biosynthesis and degradation proteins [BR:
gec01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
GEO60473_20190
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
Peptidase_C92
LysM_OapA
LysM2_CERK1_LYK3_4_5
LRAT
HRDC
DUF4350
Motif
Other DBs
NCBI-ProteinID:
BET58979
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Position
complement(2283756..2284784)
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AA seq
342 aa
AA seq
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MSIRLRLTIFVLILLALPSLALAAKSHKVKKNETLSSIARKYHVRVADLKAANNLANTRV
KPGTILVVPPRSEAVAAEPAAEVATYKVRKGDTLIRIARKTGVSVDELRQLNNLGKKRVK
PGQVLTLRAVADEEQPARKLALKKPLKSLDIYNESEYERSLADLVGESGEDAQADFTKGV
TLGGDGVTELKKTAYSFIGTRYRFGGTTRKGLDCSSFVQHVFRELDVTLPRTAREQFHVG
NPVATGDLQKGDLLFFHTYARFPSHVGIYLGNNKMIHASSRDRRVVISSIDTPYYRARFI
GAKRISQINPDVLKLDDLLTDVEEEGIEDILANDTLGVGLLK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagtatacgattgcgacttaccatcttcgtcctcatccttttagccttaccctccttg
gcgcttgccgccaaaagtcataaagtcaaaaagaacgaaaccctctcttccattgcccgc
aagtaccacgtccgcgtcgccgatctcaaagcagccaacaaccttgccaatactcgtgtg
aagcccggcaccatcctggttgtccccccccgttccgaggccgtcgcagcggagcctgcg
gccgaggtcgctacctacaaggtgcgcaagggcgacaccctgatccggattgcccgcaag
accggcgtgtccgtggatgaactgcgtcagctgaacaacctcggcaagaaaagggtaaag
cccggccaggtcctcacgctccgggccgtcgccgacgaggagcaaccggccaggaagctc
gccctcaagaagcccctcaagagcctcgacatctataacgaaagcgaatacgagcgcagc
ctcgcggacctcgtgggcgagagcggcgaagacgcccaggccgatttcaccaaaggggtg
acccttggcggcgacggcgtcaccgagctgaaaaagacggcctacagtttcatcggcacc
cgctaccgcttcggcggaaccacccgcaaggggctcgactgctccagctttgttcagcac
gtcttccgcgaactggatgtaaccctcccccgcaccgcccgcgaacaattccacgtgggc
aacccggtcgccaccggagacctccagaagggcgatcttcttttctttcacacctatgcc
cgcttcccttcccacgtgggcatctatctcggcaacaacaaaatgatccacgcctcctca
cgggaccggcgagtggtcatatcctcaatcgacaccccttactaccgtgctcgcttcatc
ggcgccaagcgtatttcacagatcaaccccgacgtgctcaagctggacgacctgctgacc
gacgtggaagaagaggggatcgaagacatccttgccaacgataccctcggcgttggcctg
ttgaagtag
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