Geobacter sp. 60473: GEO60473_24890
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Entry
GEO60473_24890 CDS
T10337
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
gec Geobacter sp. 60473
Pathway
gec00470
D-Amino acid metabolism
gec00550
Peptidoglycan biosynthesis
gec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gec00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GEO60473_24890 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GEO60473_24890 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gec01011
]
GEO60473_24890 (murD)
Enzymes [BR:
gec01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
GEO60473_24890 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
gec01011
]
Precursor biosynthesis
Amino acid ligase
GEO60473_24890 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_7
2-Hacid_dh_C
XdhC_C
AdoHcyase_NAD
TrkA_N
adh_short_C2
HcgC
adh_short
Pribosyltran
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
BET59449
LinkDB
All DBs
Position
complement(2784831..2786189)
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AA seq
452 aa
AA seq
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MDLKGKNILVVGLARTGVAVARFLAAQGARVTVTDLRDETALAEPLEQLAGYPVTYVLGR
HDEADFAAAETVVVSPGVPQESPYLQAARRAGREVVTEIELASRFITAPLVAITGTNGKT
TTTTLTGELFAGCGFRTFVGGNIGNPLIELVETGATVDRVVVEISSFQLEWIRSFRPTVA
VLLNITEDHLDRYATYQEYIDAKARIFENQTASDWAVLNMDDPIVAGLAGRTRAAVFPMS
RQRELGEGIFYRDGAIIFRHAGRQERFPTDRFRITGVHNIENIMASLAAALLLGCDADRA
LACVEAFGGLPHRMELVRELNGVRYFEDSKATNVGSVEKALASFNDITLIAGGKDKGGSY
APLAGLVAERVRHMILIGEAQERMARELGHLTDTRMAVTLEDAVELAASLTQPGGVVLFS
PACSSFDMFRDYEERAQRFRAAVDALSPGGTP
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggacctcaaaggaaagaacatactcgttgtgggcctcgcccggaccggcgtggcggtt
gcccgtttccttgcggcgcagggcgcacgggtgaccgtgaccgacctgcgggacgaaacc
gccctggctgaacccttggagcaactggccggctaccctgtgacctacgtgctgggacgt
cacgacgaggctgatttcgctgcggctgaaacggtggtggtaagcccgggcgtgccccag
gaaagcccctatctccaggcggcgcggcgggccgggcgtgaggtcgttaccgagatcgag
cttgcgtcccggttcatcaccgcgcctctggtggccatcactggcaccaacggcaagacg
accaccacgaccctcacgggcgaactcttcgcgggatgcgggttccggacgttcgttggg
ggaaatatcggcaacccgctcatcgaactggtggagaccggggcaacagtggaccgggtg
gtggttgagatcagctccttccagctcgaatggatccgctcgttccggcccacggtcgcg
gtgctcctcaacatcaccgaggaccacctggaccggtacgccacctatcaggagtatatc
gacgccaaggcccggattttcgagaaccagaccgcgtcggactgggcggtcctcaacatg
gacgatccgatcgtggcaggccttgccggcaggacgcgcgccgcagtgttccccatgagc
cggcaacgggagcttggcgaggggatattctatcgggacggggccatcatcttccgccac
gccggtcgccaggagcggtttcccacggaccgcttcaggatcaccggggtccacaacatt
gagaacatcatggcgtcccttgccgccgcgctgcttctgggatgcgatgccgaccgggcg
ttggcgtgcgttgaggcgttcggcggactcccccaccggatggaactggtgcgcgaactc
aacggcgtccgctacttcgaggacagcaaggccaccaacgtggggagcgtggaaaaggcg
ctggctagcttcaacgacatcaccctcatcgccggcggcaaagacaaggggggcagctat
gcccccctcgccgggctcgtggccgagcgcgtacggcatatgatcctgatcggcgaggca
caggagcgaatggcccgtgaactggggcatctcacggacacccggatggctgtgaccctg
gaagatgccgtggagcttgccgcctcactgacgcagccggggggggtggtcctcttctcg
cccgcctgttccagcttcgacatgttccgcgattacgaagagcgggcgcagcggtttcgc
gccgccgtggacgcgctgagtccgggaggcacgccgtga
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