Geobacter sp. 60473: GEO60473_26720
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Entry
GEO60473_26720 CDS
T10337
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
gec Geobacter sp. 60473
Pathway
gec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GEO60473_26720 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gec03400
]
GEO60473_26720 (uvrB)
DNA repair and recombination proteins [BR:
gec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GEO60473_26720 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GEO60473_26720 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
Kinesin
AAA_5
Motif
Other DBs
NCBI-ProteinID:
BET59632
LinkDB
All DBs
Position
2989624..2991618
Genome browser
AA seq
664 aa
AA seq
DB search
MERFRLASDYEPRGDQPRAIAELSEGIVRGDRDQVLLGVTGSGKTFTMANVIAAVNRPAL
VLAPNKTLAAQLYGEFRELFPDNAVEYFVSYYDYYQPEAYIPTTDTFIEKDSSINDEIDK
LRHAATRSLLTRRDVIIVASVSCIYGIGSPAEYQAMHIFFHQGDEYGRDELLRKLVDIQY
ERNDLDFHRGTFRVRGDIVEIFPAHEGERAYRIEFFGDTVDAISEIDPLRGVVVQRLTKC
AVYPASHYVATRETLDRAMEEIRTDLRERLQWFRERNMLVEAQRLEQRTMFDLEMMEEMG
FCQGIENYSRYFDGRTPGEPPYTLLDYFPRDFILFADESHITVSQVGGMYRGDRSRKETL
VNYGFRLPAALDNRPLTFGEFTERLNQTVYVSATPADYELQQSGGVVVEQVIRPTGLLDP
LIEVRPATEQVDDLLHEVRETTARGERVLVTTLTKRMAEDLTDYYRDLGVRVRYLHSDID
TIQRMQIIRDLRMGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSARSLIQTCGR
AARNVNGRVIMYADTVTGSMQSCLGETARRRALQEAFNTEHGITPQTVKKGLRTILESIE
ERDYYTVAAVAETREEYISADEIPKRVKKLRKEMLDAAKKLEFERAADLRDQIKKLEEME
LRLR
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcttcagactggcaagcgattacgaaccccgcggcgaccagccccgggccatt
gccgaactctcggaagggattgtcaggggcgaccgggatcaggtacttctgggggtcacc
ggcagcggcaagacgtttaccatggccaacgtcatcgccgccgtgaaccgccccgccctg
gtgctggcccccaacaagaccctggcggcccagctctacggcgaattccgggaactgttt
ccggacaatgccgtggaatatttcgtctcctactacgactactaccagccggaagcctac
atccccaccaccgacaccttcatcgagaaggactcctccatcaacgacgagatcgacaag
ctgcgccatgcggccacgcggagcctgctgacccggcgcgacgtgatcatcgttgcctcg
gtgtcatgcatctacggcatcggctccccggccgagtaccaggccatgcacatcttcttt
caccagggggacgagtatggccgggacgagctgctgcggaagctggtcgacatccagtat
gaacggaatgatctggacttccaccgggggaccttccgggtgcggggggatatcgtggag
atattcccggcccacgagggggagcgggcctaccggatcgagttcttcggcgacacggtg
gacgccatcagcgaaatagatcccttgcggggcgtggtggttcagcgcctgaccaagtgc
gccgtctatccggcttcccattacgtggcgacgcgcgagaccctggaccgggccatggag
gagatccgcaccgacctgcgggaacggctccagtggttccgggagcggaacatgctcgtg
gaggcccagcggctggagcagcggaccatgttcgacctggagatgatggaggagatggga
ttctgccaggggatcgagaactattcccgctacttcgacggccggacgccgggagagccc
ccctacaccctgctcgactacttcccccgcgacttcatcctcttcgcggacgaatcccac
atcaccgtctcccaggtgggagggatgtaccggggggaccggagcaggaaagaaacccta
gtgaactacggcttccgcctgccggcagccctcgataaccggcccctcaccttcggggag
ttcaccgagcggctcaaccagactgtctacgtctcggccaccccggccgactacgaactg
cagcagagcggcggcgtggtggtggaacaggtgatcaggcccacgggcctccttgacccg
ctcatcgaggtccgtcctgccacggagcaggtggacgatctcctgcacgaggtccgggag
accacggcccggggtgaacgggtgctcgtaaccaccctcaccaagcggatggccgaggac
ctgaccgattactaccgggacctgggggtgcgggtcaggtacctccattccgacatcgac
actatccagcggatgcagatcatccgcgatctgcgcatgggggagttcgatgtcctggtc
ggcatcaacctcctgcgggaggggctcgacattcccgaagtgtcgctggtggcgatcctg
gacgccgacaaggaggggttcctccgctccgcccgctccctcatccagacctgcggccgg
gccgcccgcaacgtgaacggcagggtcatcatgtacgccgacaccgtgaccggctccatg
cagagctgcctcggcgaaaccgcccggcgtcgtgctcttcaggaggccttcaacaccgaa
cacggcatcacgccccagaccgtgaaaaaggggctgcggaccatcctggagtccatcgag
gagcgtgattactacaccgtcgccgccgttgccgagactcgggaagaatacatctctgcc
gacgaaataccgaaaagggtgaagaagctccgcaaggagatgctcgacgcggcaaagaag
ctggaattcgaacgggcggctgatctcagggatcagatcaaaaaactggaggaaatggag
ctgcggctgcgctga
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integrated database retrieval system
