Geobacter sp. 60473: GEO60473_30400
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Entry
GEO60473_30400 CDS
T10337
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gec Geobacter sp. 60473
Pathway
gec00300
Lysine biosynthesis
gec00470
D-Amino acid metabolism
gec01100
Metabolic pathways
gec01110
Biosynthesis of secondary metabolites
gec01120
Microbial metabolism in diverse environments
gec01230
Biosynthesis of amino acids
Module
gec_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gec00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GEO60473_30400 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GEO60473_30400 (lysA)
Enzymes [BR:
gec01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GEO60473_30400 (lysA)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BET60000
UniProt:
A0AA86J5Q6
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Position
3401115..3402368
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AA seq
417 aa
AA seq
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MNHFQYKGNELHAEEVSLKEIVARVGSPVYVYSHATLTRHFTAFDEAFAGVPHTICYSVK
ANSTQAVLRTFITLGGGADIVSGGELYRALQAGVDPKKVVYSGVGKKDDEIEYALNTGIL
MFNVESEQELTRISEIASRMGKKAGIAIRVNPDVDPQTHPYITTGLKNAKFGITIDRAMA
EYARAKTLPGIDVIGIDMHIGSQLTKVTPFVDSIEKLKTMIANLRGQGIDLQYFDCGGGL
GIQYSTEEPPLPADYGKEIVAATKELGMHLLFEPGRNIVGNAGILVATCLFTKERDEKNF
IMIDAGMNDLARPALYGSFHGVQPVVKDQDGMIVADIVGPICESGDFLVKDREVPMFRQG
DLMAFMSAGAYGFAMSSTYNSRPRVAEVMVKGNQFEVVRERETVEDLIRGERVPSFL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacttccagtacaaggggaacgagctccacgccgaggaggtttcgctcaaggag
atcgtggcccgggttggtagcccggtctatgtttattcccacgccaccctgacccggcac
ttcactgcctttgacgaggccttcgccggcgtgccccacaccatctgctactcggtcaag
gccaactccacccaggcagtgctcaggacgttcatcaccctgggcggtggcgccgacatc
gtttccggcggcgagctctaccgcgccctccaggccggcgtcgatccgaaaaaagtggtc
tattccggggtgggcaagaaggacgacgagatcgagtacgccctgaacaccggcatcctc
atgttcaacgtggagtcggagcaggagctgacccgcatctccgagatcgcctcccgcatg
ggcaagaaggcgggcatcgccatccgggtcaaccccgacgtggacccccagacccatccc
tacatcaccacgggcctcaagaacgccaagttcggcatcaccatcgaccgggccatggcc
gaatacgcccgcgccaagacgctccccggcatcgatgtgatcggcatcgacatgcacatc
ggctcccagctgaccaaggtcactcccttcgtggactccatcgagaagctgaagacgatg
atcgccaacctgcgcggccaggggatcgacctgcagtacttcgactgcggcggcggcctg
gggatccagtacagcaccgaagagccgccgctccccgccgactacggcaaggagatcgtc
gcggccaccaaagagctgggcatgcacctgctcttcgagccgggccgcaacatcgtgggc
aacgctggcatcctggtggccacgtgcctcttcaccaaggagcgggacgagaagaacttc
atcatgatcgacgccggcatgaacgacctggcccgtccggccctctacggctctttccac
ggcgtacagccggtggtcaaggaccaggacggcatgatcgtggccgatatcgtgggtccc
atctgcgagtcgggcgacttcctggtgaaggaccgggaggtacccatgttccgccagggc
gatctgatggccttcatgtcggccggcgcctacggcttcgccatgagcagcacctacaac
agccgcccccgggtggccgaggtgatggtcaagggtaaccagttcgaagtggtccgcgag
cgggagacggtggaagacctgatccggggcgagcgggtgccgtcgttcctgtaa
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