KEGG   Candidatus Gullanella endobia: FVIR_GE00238
Entry
FVIR_GE00238      CDS       T04502                                 
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
  KO
K02344  DNA polymerase III subunit psi [EC:2.7.7.7]
Organism
ged  Candidatus Gullanella endobia
Pathway
ged03030  DNA replication
ged03430  Mismatch repair
ged03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ged00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FVIR_GE00238 (holD)
   03430 Mismatch repair
    FVIR_GE00238 (holD)
   03440 Homologous recombination
    FVIR_GE00238 (holD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ged03032]
    FVIR_GE00238 (holD)
   03400 DNA repair and recombination proteins [BR:ged03400]
    FVIR_GE00238 (holD)
Enzymes [BR:ged01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FVIR_GE00238 (holD)
DNA replication proteins [BR:ged03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FVIR_GE00238 (holD)
DNA repair and recombination proteins [BR:ged03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FVIR_GE00238 (holD)
SSDB
Motif
Pfam: DNA_III_psi DUF1435
Other DBs
NCBI-ProteinID: CUX96108
UniProt: A0A143WQW0
LinkDB
Position
I:complement(437516..437932)
AA seq 138 aa
MTIIKRNWQLKQLGITQWILRYPSLLYSEVAIKLLDHIRLLLISDQLPPIDHPLIIDVAR
SMRLTSSQLYGVKLEHVILLPESMRCHCWCLGLKINRDFSGIVFHTPPILALSVDANAKR
KLWRQISDYEYRINIPIS
NT seq 417 nt   +upstreamnt  +downstreamnt
gtgacaataataaaacgcaattggcaattaaaacaactcggtataacacaatggatactc
cgatatccatcactgttatacagtgaggttgcaattaagttattagatcatattcgctta
ttattaatatctgaccagctaccgccaattgatcatcctttaataatcgatgtagcacgt
agtatgagactaacatcatcacaactttatggagtaaagcttgaacacgtaatactatta
ccagagagtatgcgttgccattgttggtgtcttggattgaaaattaatcgcgatttttca
ggtatagtctttcatactccgccgatactagcactttcagtagatgctaatgcaaaacgt
aagttatggcgccaaataagtgattacgaataccgtattaatattcctattagttaa

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