Candidatus Gullanella endobia: FVIR_GE00238
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Entry
FVIR_GE00238 CDS
T04502
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
ged
Candidatus Gullanella endobia
Pathway
ged03030
DNA replication
ged03430
Mismatch repair
ged03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ged00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FVIR_GE00238 (holD)
03430 Mismatch repair
FVIR_GE00238 (holD)
03440 Homologous recombination
FVIR_GE00238 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ged03032
]
FVIR_GE00238 (holD)
03400 DNA repair and recombination proteins [BR:
ged03400
]
FVIR_GE00238 (holD)
Enzymes [BR:
ged01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FVIR_GE00238 (holD)
DNA replication proteins [BR:
ged03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FVIR_GE00238 (holD)
DNA repair and recombination proteins [BR:
ged03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FVIR_GE00238 (holD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
DUF1435
Motif
Other DBs
NCBI-ProteinID:
CUX96108
UniProt:
A0A143WQW0
LinkDB
All DBs
Position
I:complement(437516..437932)
Genome browser
AA seq
138 aa
AA seq
DB search
MTIIKRNWQLKQLGITQWILRYPSLLYSEVAIKLLDHIRLLLISDQLPPIDHPLIIDVAR
SMRLTSSQLYGVKLEHVILLPESMRCHCWCLGLKINRDFSGIVFHTPPILALSVDANAKR
KLWRQISDYEYRINIPIS
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
gtgacaataataaaacgcaattggcaattaaaacaactcggtataacacaatggatactc
cgatatccatcactgttatacagtgaggttgcaattaagttattagatcatattcgctta
ttattaatatctgaccagctaccgccaattgatcatcctttaataatcgatgtagcacgt
agtatgagactaacatcatcacaactttatggagtaaagcttgaacacgtaatactatta
ccagagagtatgcgttgccattgttggtgtcttggattgaaaattaatcgcgatttttca
ggtatagtctttcatactccgccgatactagcactttcagtagatgctaatgcaaaacgt
aagttatggcgccaaataagtgattacgaataccgtattaatattcctattagttaa
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