Candidatus Gullanella endobia: FVIR_GE00270
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Entry
FVIR_GE00270 CDS
T04502
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ged
Candidatus Gullanella endobia
Pathway
ged03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ged00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FVIR_GE00270 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ged03019
]
FVIR_GE00270 (orn)
03009 Ribosome biogenesis [BR:
ged03009
]
FVIR_GE00270 (orn)
Messenger RNA biogenesis [BR:
ged03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FVIR_GE00270 (orn)
Ribosome biogenesis [BR:
ged03009
]
Eukaryotic type
Pre-60S particles
RNases
FVIR_GE00270 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CUX96138
UniProt:
A0A143WQZ3
LinkDB
All DBs
Position
I:complement(486065..486610)
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AA seq
181 aa
AA seq
DB search
MSINDKNLIWIDLEMSGLNPKRDRIIEIATLVTDTNLAILAEGPVLAIHQSDKQLALMDE
WNIRIHTASGLINRVRQSLLNEDAAAVKTLAFLSEWVPAGKSPICGNSVGQDRQFLFRYM
PALEAYFHYRYLDVSTLKELAFRWKPEILSRLKKNNTHQALDDIRESVAELAYYRDHFIS
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattaatgataagaacttaatttggattgatctagaaatgagtggtcttaatcca
aaacgtgatcgtattattgaaatagcaacactagttactgatactaacctggctatttta
gcagaaggtccggtattagctatccatcaatctgataaacaattagcattaatggatgaa
tggaatattcgtattcataccgctagtggattgattaatcgagtaagacaaagtcttctt
aatgaagacgcagcagcagtgaaaaccttagcctttctttccgaatgggtaccagcaggg
aaatcgccaatttgcggtaatagtgttggtcaggatcggcagttcttattccgctacatg
ccagctcttgaagcatattttcactaccgttatctagatgttagtacgctaaaagaattg
gcatttcgatggaaaccagaaattttatctaggctaaaaaaaaacaacactcatcaagca
ttggatgatattcgagaatcagtagcagagttagcttattatcgtgatcattttatctct
ctgtaa
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