Candidatus Gullanella endobia: FVIR_GE00287
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Entry
FVIR_GE00287 CDS
T04502
Symbol
fis
Name
(GenBank) DNA-binding protein Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
ged
Candidatus Gullanella endobia
Brite
KEGG Orthology (KO) [BR:
ged00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ged03000
]
FVIR_GE00287 (fis)
03036 Chromosome and associated proteins [BR:
ged03036
]
FVIR_GE00287 (fis)
03400 DNA repair and recombination proteins [BR:
ged03400
]
FVIR_GE00287 (fis)
Transcription factors [BR:
ged03000
]
Prokaryotic type
Helix-turn-helix
Other families
FVIR_GE00287 (fis)
Chromosome and associated proteins [BR:
ged03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
FVIR_GE00287 (fis)
DNA repair and recombination proteins [BR:
ged03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FVIR_GE00287 (fis)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
HTH_28
Xre-like-HTH
HTH_30
Phage_NinH
Inhibitor_I24
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
CUX96152
UniProt:
A0A143WQZ8
LinkDB
All DBs
Position
I:513183..513479
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AA seq
98 aa
AA seq
DB search
MFEQHVNSDILIIPTINSQNQVIKKPLRDFIKQAMKNYFSQLKTEDVNDLYELVLSETEQ
PLLDILMQHTRGNQTRAAQIMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaacacgtaaattctgacatattaattattccaaccattaattctcaaaat
caggtaataaaaaaacctctgcgtgattttataaaacaagcaatgaagaattatttctct
caactaaagactgaagatgtgaacgacctttatgaactggtattatctgaaacagaacag
cctttattagatatactcatgcaacatacgcgcggcaatcaaactcgcgcagcacaaatt
atgggaataaatcgtggtactttacgtaaaaaattaaaaaaatacggtatgaattaa
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