Candidatus Gullanella endobia: FVIR_GE00310
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Entry
FVIR_GE00310 CDS
T04502
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ged
Candidatus Gullanella endobia
Brite
KEGG Orthology (KO) [BR:
ged00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ged03021
]
FVIR_GE00310 (rpoH)
Transcription machinery [BR:
ged03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FVIR_GE00310 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
DUF5412
Motif
Other DBs
NCBI-ProteinID:
CUX96173
UniProt:
A0A143WR60
LinkDB
All DBs
Position
I:complement(555177..556034)
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AA seq
285 aa
AA seq
DB search
MIKNMQVLVYVPQSSLEAYVRTANTYPILTADEERILAERLHYQGDIEAAKQLILSHLRF
VVHIARNYSGYGLPQADLIQEGNIGMMKAVRRFKPEVGVRLVSFAVHWVKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEIVAKELGVTSKDIREMESRMAAQDI
TLDPTPEDDPFEGQHIAPVLYLKDKSSDFADSIEEDNWDDHAADKLNLAIENLDERSQDI
IRARWLDNNNKSTLQELANRYGVSAERVRQLEKNAMKKMRLAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaatatgcaagtgttagtatatgttcctcagagcagtctagaagcttatgtt
aggactgctaatacttatccaatacttacagcggatgaagaacgaatactagctgaacga
ttacattatcaaggtgatatagaggcggctaaacaacttattttatctcaccttcgcttt
gttgttcatattgctcgtaactattcaggttacggtttgccgcaagctgatttgattcaa
gaaggaaacatcggcatgatgaaagctgtccgtcgttttaaaccggaagtaggtgtacgg
cttgtttcttttgcggttcactgggttaaggcggaaattcacgaatatgtattgcgtaat
tggcgtattgtaaaagtggcgactacaaaagcacaacgtaagctattctttaatcttcgt
aaaacaaagcaacgcttaggttggtttaatcaagacgaagtagaaatagtagctaaagag
ttaggcgtaaccagtaaggatatccgtgaaatggaatctcgtatggctgcacaagatata
acacttgatcctacaccagaagatgatcctttcgaagggcagcatatagcgcctgtactc
tatcttaaagataaatcgtccgactttgccgatagtattgaagaggataactgggatgat
cacgctgctgataaactaaatttagcaatagaaaatctcgatgaacgtagccaagatatt
atccgtgcgcgttggttggataataacaacaaaagtacactacaagagttagcaaaccgt
tatggtgtttctgcagaacgcgtgcgtcaacttgaaaaaaatgctatgaagaaaatgcgt
ttagcaatagaggcctaa
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