Candidatus Gullanella endobia: FVIR_GE00358
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Entry
FVIR_GE00358 CDS
T04502
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ged
Candidatus Gullanella endobia
Pathway
ged03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ged00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FVIR_GE00358 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ged03021
]
FVIR_GE00358 (rpoA)
03400 DNA repair and recombination proteins [BR:
ged03400
]
FVIR_GE00358 (rpoA)
Enzymes [BR:
ged01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FVIR_GE00358 (rpoA)
Transcription machinery [BR:
ged03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FVIR_GE00358 (rpoA)
DNA repair and recombination proteins [BR:
ged03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FVIR_GE00358 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
CUX96215
UniProt:
A0A143WR40
LinkDB
All DBs
Position
I:602368..603357
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AA seq
329 aa
AA seq
DB search
MQGSVIEFLKPKIVDIKQISATYAKITLEPLERGFGHTLGNALRRILLSSMPGFAVTEVE
IDGVLHEYSTKEGVKEDILEILINLKELSVRVQGKDEVILTLNKSGVGPVTAADISYNGN
VEIIKPQHVLCHLTDKNATINMRIKIQRGRGYIPASARIHSETDERPIGRLLLDACYSPI
ERIAYNVEAARVEQRTDLDKLIIEMETNGTIDPEEAIRRAATILAEQLETFVDLRDVHHP
QAKEKKPEFDPILIRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDILASRGLSLGMRLEDWPPDNITDE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaatagagtttttaaaaccaaaaatagtagatatcaaacaaatcagt
gcaacatacgcaaaaataactcttgaacctttagaacgtggttttggtcatacattaggt
aatgcacttcggcgcattctgctttcatcaatgccaggatttgcagtaactgaagttgag
attgatggtgtattacacgagtatagtacaaaagaaggggtaaaagaagatattctggaa
attcttattaatctaaaagaactttcagtaagagtacaaggtaaagatgaagttattttg
accttgaataaatctggagttggccctgtgaccgcagctgatatcagttataatggaaat
gttgaaattattaaaccacagcatgtcttatgccacttaactgataaaaatgctactatt
aatatgcgtattaaaattcagcgtggacgtggttatattccggcttctgccagaatacac
tcagaaacagatgagcgaccaatcggtcgtttactcttggatgcatgctatagccctata
gaacgtattgcctacaatgtagaagcagcgcgcgttgagcaacgtactgatctagataaa
cttattattgaaatggaaactaatggcacaatcgatcctgaagaggcaattcgacgtgca
gcaactattttagcagaacaattagaaacttttgttgatctacgtgatgtacatcatcca
caggcaaaagaaaaaaaaccagaattcgatccaattttaatacgcccagttgacgatctg
gaattaactgttcgctctgctaattgccttaaggcagaagctatccactatattggtgat
cttgtacaacgaactgaggttgagttgctgaaaacaccaaatcttggaaaaaaatctctt
actgagattaaagatatcttagcttctcgtggattatctttaggtatgcgtcttgaagac
tggcctccagataatatcactgatgaataa
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