Candidatus Gullanella endobia: FVIR_GE00468
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Entry
FVIR_GE00468 CDS
T04502
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ged
Candidatus Gullanella endobia
Pathway
ged03030
DNA replication
ged03430
Mismatch repair
ged03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ged00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FVIR_GE00468 (holB)
03430 Mismatch repair
FVIR_GE00468 (holB)
03440 Homologous recombination
FVIR_GE00468 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ged03032
]
FVIR_GE00468 (holB)
03400 DNA repair and recombination proteins [BR:
ged03400
]
FVIR_GE00468 (holB)
Enzymes [BR:
ged01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FVIR_GE00468 (holB)
DNA replication proteins [BR:
ged03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FVIR_GE00468 (holB)
DNA repair and recombination proteins [BR:
ged03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FVIR_GE00468 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
Motif
Other DBs
NCBI-ProteinID:
CUX96308
UniProt:
A0A143WRG1
LinkDB
All DBs
Position
I:829213..830211
Genome browser
AA seq
332 aa
AA seq
DB search
MKWYPWLNTTYQQILYRYQKANGHHALLLHSQPGNGEISLLYALSRWLICRQSNGVNKSC
GLCKDCRLMIAGNHPDFYQLEPEKIHKNLGVDYIRSIIESIHHNAHQGGVKVILLPNTEL
LTDQSPNVLLKALEEPPTDTYFLLGCHTLSRLLPTLRSRCLYWSLSTPNEEIGLRWLKKA
GFEDSLSAYTALRICANAPLLAEALLQPACWQKRTSLCEALQEAHISGNFLILLPILNRD
KDYEPLHWLLSLISDALKWQKSAKISLVNIDKVELVAIIANRWPARTLHMQWRNCLKCLC
QCQEISGINRELLLIHYLLNWERGISDSYLSL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtatccttggctaaatactacttatcaacagattttatatcgctaccaaaaa
gcgaatggacatcatgctttattattacatagccagcctggtaatggtgaaatctcatta
ctctatgcattgagtcgctggttaatatgtcgacaatcgaatggtgttaataagagttgc
ggtctttgtaaagattgtcgattaatgatcgctggaaaccatcctgatttttatcaatta
gaaccagaaaaaattcataaaaatttaggagtagattatattcgtagtattattgagagt
atacatcacaacgcccatcagggcggagtaaaagttatattgcttcctaatactgagtta
cttactgatcaatcgccaaacgtgttactgaaagctctagaagaaccaccaacagatact
tattttcttttaggctgccatacactatcacgtctattaccaactcttagaagtcgttgt
ctttattggtcgctatcaactccaaatgaggaaattggtttacgttggttgaagaaagca
ggttttgaagactcattatctgcttatactgcattacgaatatgtgctaacgcgccgctt
ttagcagaagcgctacttcagccggcatgttggcagaaaagaacatctctgtgcgaagca
ctacaagaagctcacattagcggaaattttttaatcctcttaccgatattaaatcgagat
aaagattatgaaccgttacattggctgcttagcttaataagcgatgctttgaaatggcag
aaaagtgcgaaaatctcgttagtaaatattgataaagtggaattagttgcgattatagct
aatcgatggccagctagaacactacatatgcaatggcgaaattgcctaaaatgtttatgt
caatgtcaagagataagcggtattaatcgagaacttttactgatacattacttgcttaat
tgggagcgaggtatatctgattcttacctttctttataa
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