Candidatus Gullanella endobia: FVIR_GE00504
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Entry
FVIR_GE00504 CDS
T04502
Symbol
spoVD
Name
(GenBank) Stage V sporulation protein D
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ged
Candidatus Gullanella endobia
Pathway
ged00550
Peptidoglycan biosynthesis
ged01100
Metabolic pathways
ged01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ged00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FVIR_GE00504 (spoVD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FVIR_GE00504 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ged01011
]
FVIR_GE00504 (spoVD)
Enzymes [BR:
ged01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FVIR_GE00504 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ged01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
FVIR_GE00504 (spoVD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
CUX96343
UniProt:
A0A143WRN6
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All DBs
Position
I:complement(892717..894609)
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AA seq
630 aa
AA seq
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MKIERNPFYSYSAKPLLFFRRALLALISILLVTGVLIVNLYYLQIICFEDYCTRSNENRI
RLVPISPSRGIIYDRNGIPLALNRSIYQLELIPEKVSNLTQTIADLRAIVCLSDDDIANF
EKERERSCRFASLPLKIGLTDVQQARFAVNQYRFPGVKVKCYQRRYYPYGSAFTHVIGYV
SKINDRDVKLLNKEGMLSNYAATHNIGKLGIERYYESTLHGKAGYKEIEVNNRGRVIRQL
YERLPQAGKDIILTLHLSLQRYIETLLIGTRSAVVVFDPRDGGILALVSNPSYDPNMFVN
GISAKKYHALLEDKNYPLINRTTQGIYPPASTVKPYISVSALTLGIINENFSLFDPGWWQ
LPDSKKRYRDWKRWGHGQLNITRALEESSDTFFYQVVYNMGIDRLSEWMKKFGYGQYTGI
DLAEEYSGVMPTREWKFARFKKPWYQGDTIPVAIGQGYWTATPLQMSKAMMTLINDGTVQ
IPHLLYGIQENDYQIPYRQPKNIQIGDPNSGFWEIVKDGMFGVANRPNGTACKSFSDAPY
KAAVKSGTAQVYGLKTNEIYNANKIAEHLRDHKLMTAFAPYNKPTVGVVVILENGGVGPT
AGEITRQILDYILLKDDTVDFSLKTSRQAK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagaacgtaatcctttttacagttattcagccaagccgctgttgttttttcgt
cgtgcactactagcgcttattagcatattactagtaaccggtgtccttattgttaattta
tactatttgcaaattatttgtttcgaggattactgcactcggtctaacgaaaatcgtatc
aggctagtacctatttcgccgagccgcggtattatttacgatcgtaatggcataccctta
gcattaaatagaagtatttatcaattagaactgataccggaaaaggtaagcaatttaaca
cagacaattgccgatctgcgtgcaattgtctgtttatccgatgatgatattgctaatttt
gaaaaagagcgtgaacgctcctgccgttttgcttcacttccgcttaaaattggattaact
gatgtacaacaggccaggttcgctgtaaaccaataccgttttccaggtgttaaagtaaaa
tgctatcagcgaagatattatccttacggttcagcattcactcatgttattggttatgtg
tcgaaaattaacgatagagacgtaaaacttctgaataaagaaggaatgctttccaattat
gctgcaacacataatattgggaaattgggtatcgaacgctattatgaaagcacactacat
ggtaaagctggttataaagaaatagaggttaataatcgaggtcgagtaatccgtcaatta
tatgagcgattacctcaagcaggaaaagatattattctgacactgcatctaagtttgcaa
cgatatatcgagacattattaattggaacccgttcagcagttgtcgtttttgatcctcga
gatggcggaatcctcgcactggtatccaatccgagttacgatcctaatatgtttgttaac
ggtatttctgcaaagaaataccacgcgttactagaggataaaaactatccacttataaat
cgtactactcaaggtatttatccacccgcctctaccgtaaaaccttatatttcagtatca
gcgctcacacttggcattattaatgaaaacttttctttatttgatccaggctggtggcaa
ttacccgattcaaagaagcgttatcgtgattggaaacgatgggggcatggtcaattaaat
attacccgagcactagaagagtcatcggatacttttttttatcaagtagtatacaatatg
ggtattgaccgactttccgaatggatgaaaaaatttggctacggccagtatactggtatt
gatttagccgaagaatactctggagtaatgccgactcgtgagtggaaatttgcgcgtttt
aaaaaaccctggtatcagggggatactattcctgttgcaattggtcaaggttactggacc
gcaacaccgttacaaatgtcaaaggcaatgatgacactaattaatgatggtacagtacaa
attccacatctactctacggtatacaagaaaacgactatcaaattccttatcgtcaacca
aaaaatattcaaataggtgatccgaattctggattctgggaaatagttaaagatggtatg
tttggtgtcgctaaccgaccaaacggtacagcatgtaaaagcttttctgatgcgccttat
aaagcagctgttaaatctggtactgctcaggtatatgggctaaaaactaatgaaatttac
aatgcaaataaaatcgctgaacacctgcgcgatcataaactgatgactgcatttgcccct
tataataaaccgacagtaggcgttgttgttattctagaaaatggcggtgtcggtccaaca
gcaggagaaattactcgacagattttagattatatccttctaaaggatgatactgtggat
ttttctttaaaaacttcacgccaagctaaatag
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