Geminocystis sp. NIES-3708: GM3708_1745
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Entry
GM3708_1745 CDS
T04168
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
gee
Geminocystis sp. NIES-3708
Brite
KEGG Orthology (KO) [BR:
gee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gee03400
]
GM3708_1745
DNA repair and recombination proteins [BR:
gee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GM3708_1745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_22
AAA_16
DUF7125
ATPase_2
AAA
Lon_C
AAA_14
ABC_tran
NTPase_1
nSTAND3
nSTAND_NTPase5
GvpD_P-loop
AAA_24
PAXNEB
PIN-TPR-GreABC
SLFN-g3_helicase
MCM
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
BAQ61339
LinkDB
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Position
complement(1915410..1916921)
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AA seq
503 aa
AA seq
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MAKTRTVYICSSCATESSQWFGKCPSCNVYGTLEEQILNGNGNGNTRAGWQSQSNHHQKP
TTPQPRISVKFSDITEQEQPRMLSGYHELDRVLGGGIVPGSLVLIGGDPGIGKSTLLLQT
ANQLSLRFPRILYVSAEESGQQIKLRASRLGVGVTKENLSESLGNNQIPDSDVFEPNLYI
LAETDLEEILRELESLRPQVAIIDSIQTLHYATLNSAPGSVSQVRECTSALMQVAKRENI
TLFIVGHVTKEGAIAGPRVLEHLVDTVLYFEGDRYASHRLLRSVKNRFGATHEIGIFEMV
DHGLDEVSNPSELFLSSRDEIAQGTATIVSCEGTRSLVVELQALVSPTSYTSPRRATTGV
DYNRLQQILAVLEKRVGIPLSKLDTYVASVGGLAVEEPAADLGMAISIVASFRDRTVDPR
TVLIGEIGLGGQVRLVSQMELRLKEAAKLGFKRAIVPKGQTYPTDIGLEIITVAKVIDAI
VVAMPGNPMNEENNDDESENDEN
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaccagaactgtttatatctgtagctcttgcgccacagaatcttcccagtgg
tttggtaaatgtcctagttgtaatgtttatggcactttagaagagcagattcttaatggt
aacggtaatggtaatacccgtgctggttggcaatctcaaagtaatcatcatcaaaaacct
accactccacaaccaagaatatccgtcaaattttctgacataaccgaacaagaacaacct
cgaatgttatcgggttatcatgaattagacagggttttaggtggtggtatcgtacctggt
tctttggtactaataggtggtgatcccggtatcgggaaatctactttactgctacaaacc
gcaaatcaattatccctccgttttcctcgtattctttatgtttcagcggaagaatcagga
caacaaatcaagttaagagcttctcgtttgggggtaggggtaacaaaagagaatcttagt
gaatctttaggcaataatcagattccagactctgatgtgtttgaaccgaatctttatatt
ttggcggagacagatttagaggaaattttgcgagaattagaatctttaagacctcaagtc
gctattattgatagtattcaaacccttcattatgctactcttaattctgcccccggatca
gtgtctcaggtgagagaatgtacttcagcattgatgcaagtagcaaaacgagaaaacata
actctttttattgttggtcatgttaccaaagaaggagcgatcgcaggtcctagagtttta
gagcatttagttgatacggtgttatattttgaaggcgatcgctatgcttcccatcgtttg
ttaagatctgttaaaaatcgttttggtgctactcatgaaattggtatttttgaaatggta
gatcatggtttggatgaagtttctaatccttcagagctatttttaagcagtcgagatgaa
atagcccaaggtactgctaccatcgtatcttgtgagggaacgagatcccttgtggttgaa
ttacaagcattagtcagccccaccagttacacttcacctcgtcgtgctaccacaggagtt
gattataataggttacaacaaattttggcagtattagaaaaaagagttgggattcccctt
tccaagttagatacttatgtagcttcggttggaggcttggctgtggaagaaccagcagcg
gatttaggtatggcgatctccattgtagctagttttcgagatcgtacagttgatcctcgt
actgtattaatcggagaaatagggttaggaggacaagtgcgtttagtgtcgcaaatggaa
ttaagattaaaagaagcggcaaaattaggctttaaacgggcgatcgtgcctaaaggacaa
acatatcctacagatataggtttagaaattatcactgtagcaaaagtcattgatgctatt
gtcgtagctatgcctggcaatcccatgaatgaggagaataatgacgatgaaagtgagaat
gatgagaattaa
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