Geminocystis sp. NIES-3708: GM3708_1843
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Entry
GM3708_1843 CDS
T04168
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
gee
Geminocystis sp. NIES-3708
Brite
KEGG Orthology (KO) [BR:
gee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gee03032
]
GM3708_1843
03036 Chromosome and associated proteins [BR:
gee03036
]
GM3708_1843
03400 DNA repair and recombination proteins [BR:
gee03400
]
GM3708_1843
DNA replication proteins [BR:
gee03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GM3708_1843
Chromosome and associated proteins [BR:
gee03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GM3708_1843
DNA repair and recombination proteins [BR:
gee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GM3708_1843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BAQ61437
UniProt:
A0A0D6AF68
LinkDB
All DBs
Position
2017286..2017570
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AA seq
94 aa
AA seq
DB search
MNKGELVDAVAAKADVTKKQADTVISAVVESIMEAVSSGDKVTLVGFGSFESRDRKAREG
RNPKTGEKMEIPATKVPAFSAGKLFKERVAPPKS
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggcgaattagtagatgcagtagcggctaaggcagatgttactaaaaaacaa
gctgacaccgttatcagtgccgtagtagagtctattatggaagcggtttcttctggtgat
aaagtaaccttagtcggttttggttcttttgaaagtcgtgacagaaaagcccgtgaagga
cgtaaccccaaaactggtgaaaaaatggaaattccagccacaaaagttcctgctttttct
gctggtaaactttttaaagaaagagttgcacctcctaagtcttaa
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