Geminocystis sp. NIES-3708: GM3708_1883
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Entry
GM3708_1883 CDS
T04168
Name
(GenBank) carotenoid cis-trans isomerase
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
gee
Geminocystis sp. NIES-3708
Pathway
gee00906
Carotenoid biosynthesis
gee01100
Metabolic pathways
gee01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gee00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
GM3708_1883
Enzymes [BR:
gee01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
GM3708_1883
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
HI0933_like
Pyr_redox_2
GIDA
Thi4
FAD_binding_3
FAD_oxidored
ImmE5
GMC_oxred_N
Lycopene_cycl
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
BAQ61477
UniProt:
A0A0D6AFA6
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All DBs
Position
2055862..2057355
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AA seq
497 aa
AA seq
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MSEYQVIVIGSGIGGLVTATQLAAKGIKVLVLESYLIPGGSAGYFEREGYRFDVGASMIF
GFGEKGTTNLLTRALSAVNATMETIPDPVQIHYHLPNNLDLKVHRDYDKFLQELYNHFPE
EEKGIKSFYNECWQVFNCLNSIELLSLEEIRYLTRVFFQHPLSCLGLLKYLSLNVGDVAR
KYIKNPELLKFIDMECYCWSVVPADLTPMINAGMVFSDRHYGGINYPKGGVGKIAETLAE
GLQNLGGEIHYQAKVREIIIKNNQAIGVKLANGKEYFAQKIVSNATRWDTFDKLIDKDKK
PKKEKKWQKNYHQSPSFLSLHLGVEARVLAHNPECHHIILDKWNNLETEQGTIFVSIPTL
LDPSLAPEGYHIIHAFTPSSIEYWENLSSQQYEYKKEEAAGRVIERLEEIFPHLDAGLDY
MEIGTPRTHRRFLGRINGTYGPIPAKRLNGLLSMPFNRTAIKNLYCVGDSTFPGQGLNAV
AFSGFSCAHRIAVDLGY
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtatcaagtaattgtaattggctctggtattggtggtttagtcacagcaacc
caattagcggctaaaggaatcaaagttttagttttagaaagttatcttatccccggtggt
agtgccggttattttgaaagagaaggttatcgttttgatgtaggtgcttcgatgattttt
ggcttcggggaaaaaggcactaccaatttattaacccgtgctttatctgctgtcaatgcc
actatggagactataccagatcccgtacaaattcactatcatttacctaataatcttgat
ttaaaagttcatcgagattatgataaatttttgcaagaattatataatcattttccagaa
gaagagaaagggattaaaagtttttataatgaatgttggcaagtgtttaactgtcttaac
tccatagaattactttctcttgaggaaattcgctacttaactcgtgtcttttttcagcat
ccgttatcttgtcttgggttacttaaatatttatctttaaatgttggtgatgttgctcgt
aaatatatcaaaaatcctgaattacttaaatttattgacatggagtgttattgttggtca
gttgtaccagcagatttaactccgatgattaacgctggaatggtattttctgatcgccat
tatggcgggataaactatcctaaaggaggagttggtaaaatagcagaaactttagccgaa
ggtttacaaaacctagggggagagattcattatcaagcaaaagttagggaaattattatt
aaaaataatcaagccataggagtaaaattagccaacggcaaagaatattttgctcaaaaa
attgtctctaacgctacccgttgggatacttttgataaattaatcgataaagataaaaaa
ccgaaaaaagaaaaaaaatggcagaaaaattatcatcaatctcctagttttttaagccta
catttaggagttgaagccagagttttagcacataatccagaatgtcatcacataatctta
gataaatggaataacttagaaaccgaacaaggtacaatttttgtttctatacctacttta
ctagatccaagtttagcacctgaaggttatcatatcatccatgctttcaccccaagctca
atagaatattgggaaaacttatcatcacaacaatatgagtataaaaaagaagaagccgct
gggcgtgtaattgagcgtttagaagaaattttccctcacttagatgctggtttagactat
atggaaattggcactccccgcacccatagacgctttttaggtagaattaatggtacatat
ggaccgattcctgctaaacgtcttaatggtttattatcaatgcctttcaatcgtacagct
atcaaaaacttatattgtgtcggagatagtacatttcccggacaaggtttaaatgccgtg
gctttttctggttttagttgtgcccatcgtatcgctgttgacttgggatactaa
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