Geminocystis sp. NIES-3708: GM3708_2008
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Entry
GM3708_2008 CDS
T04168
Name
(GenBank) pro-zeta-carotene desaturase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
gee
Geminocystis sp. NIES-3708
Pathway
gee00100
Steroid biosynthesis
gee00909
Sesquiterpenoid and triterpenoid biosynthesis
gee01100
Metabolic pathways
gee01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gee00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
GM3708_2008
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
GM3708_2008
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gee01006
]
GM3708_2008
Enzymes [BR:
gee01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
GM3708_2008
Prenyltransferases [BR:
gee01006
]
Terpene biosynthesis
Squalene/phytoene synthase
GM3708_2008
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
BAQ61602
UniProt:
A0A0D6AFN4
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Position
complement(2188375..2189187)
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AA seq
270 aa
AA seq
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MNLKKDALKILKETSRTFYIPISRLPNGLQEAVTSAYLCMRAIDEIEDHPHIDNLTKAKI
LRDISLALQSGHEHITHEEMAKAIKSYEYIIPEVSYRFGEWALLAPPSIAGRIWDATGAM
ADRMAYWSENNWTIKTKSNLDQYTFSVAGSVGLLLSDLWGWYDNTQTNREDAIGFGRGLQ
AVNILRNHQEDKIRGVSFFPQGWELEDMHHYARYNLSLADAYAKSLPKGPALQFCQIPLT
LAHATLEVLILGKPKLTRNDVMALVAQVCG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgaagaaagatgccttaaaaatacttaaggaaacaagtcgaactttttatatt
cccattagtcgtttaccaaatggattacaagaagccgttacatctgcttacttatgtatg
agagctatcgatgaaattgaagatcacccgcacattgataatcttaccaaagctaaaata
ttaagagatattagtctagctttacaatcaggtcatgaacatattacccatgaggaaatg
gcaaaagcaattaaatcctatgagtatataatacctgaggttagttatcgttttggtgaa
tgggctttacttgcacctcctagtatcgcaggaagaatttgggacgctacaggagcaatg
gctgatagaatggcttattggtcagaaaataattggacaattaaaactaaatctaatttg
gatcaatatacttttagtgtagctggttctgtgggtttattattatctgatttatgggga
tggtatgacaacactcaaacaaatcgagaggatgctattggttttggtagaggcttacaa
gcagtcaatattctccgaaatcatcaagaagataaaattagaggagtgagtttttttcct
caaggttgggagttagaagatatgcaccattatgcccgttataatctcagtttagctgat
gcttatgcaaagtctttaccaaaaggtcctgctttacaattttgtcaaatacctttaact
cttgctcatgctactttagaagtcttaattttaggtaaacctaagctaacacgtaatgat
gtgatggctttggttgcccaagtatgtggttaa
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