Geminocystis sp. NIES-3708: GM3708_2419
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Entry
GM3708_2419 CDS
T04168
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gee
Geminocystis sp. NIES-3708
Brite
KEGG Orthology (KO) [BR:
gee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gee03032
]
GM3708_2419
03400 DNA repair and recombination proteins [BR:
gee03400
]
GM3708_2419
Enzymes [BR:
gee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GM3708_2419
DNA replication proteins [BR:
gee03032
]
Prokaryotic type
DNA Topoisomerases
GM3708_2419
DNA repair and recombination proteins [BR:
gee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GM3708_2419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BAQ62013
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All DBs
Position
2659719..2662247
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AA seq
842 aa
AA seq
DB search
MSRSYLEYAMSVIVGRALPDARDGLKPVHRRILYAMYELGLMPDRPFRKCARVVGEVLGK
YHPHGDTAVYDALVRMAQDFSMRNPLINGHGNFGSVDNDPPAAMRYTECRLQALATNGLL
RDIEAETVDYIDNFDGSQQEPVVLPARIPQLLLNGATGIAVGMATNIPPHNLGELINGAV
AMIHNPDITDLELMQYIPGPDFPTGAQILGRQGIKDAYTTGRGSITMRGVANIETVSNKG
RQDKEAIIVTELPYQTNKAALIEKIAELVNDKKIDGISDIRDESDRNGMRIVIELKRDAY
PRVVLNNLYKQTAIQSNFGANMLALVNNEPQLLTIRKFLEVFLEFRVETIIRRTRYLLKK
AEERDHLLQGLLIALNNLDAVIRIIRGAADTATAKQELITNFELSETQADAILQMQLRRL
TALEAEKIEAEHQDLMTQIIDLNDILARKERIDTIIEAELAEIKTLHATPRRTEIVQNDG
DLGDIDLIANEQVVILLTKQGYLKKMLVNTFEAQNRATRGKSGAKIKDDDVIEHFFTGCD
HDRVLFFSDKGVVYGLSAYQIPSSSRTARGVPIVQLLPVASDEKITSIIPVSEFTDHEYL
VMLTKKGFIKKTALSAFGNIRSNGLIAISLEDNDELRWVRLATEDDSILIGSRRGMAIHF
HADNQQLRPLSRTAKGVKSMKLRTGDQIISMDILPSQVVANIAEAGENDDEENIDIENEE
ELTNDTSKDAPWALAVTTSGYGKRVPVTQFRLQRRAGIGVKAIRFRKPKEELAALHIVNG
DDEFMIITTRGIIIRCDVNAVSLQSRNASGVRVQKLDSDDAIAGIALVPPSEEGEESVIT
EE
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctcttacctcgaatacgccatgagcgttattgtcggtagggcgttacctgac
gctagggatggattaaaacctgttcatcgacgcattctttacgctatgtatgaattagga
ttaatgcccgatcgcccttttcgtaaatgtgctagggttgtaggggaagttttgggtaaa
tatcacccccacggtgacacggcggtatatgatgccttggtgaggatggcacaagatttt
tccatgcgtaaccccctcataaatggccatggaaatttcggcagtgttgataatgatcct
ccagcggcgatgcgttatacagagtgccgtttacaggctttggcgactaatggtttatta
cgagatattgaagcagaaaccgttgattatattgataactttgatggttcgcaacaagag
cctgtcgtattaccagcgagaataccccaattattattaaatggtgcaacgggtatcgct
gtgggtatggctaccaatattcctcctcataatttaggggaattaatcaatggtgcagtg
gcgatgattcacaatcctgacattacggacttggagttaatgcaatacataccaggtcct
gattttcccacaggtgcacaaattttgggcagacaaggcataaaagacgcttataccact
ggtagaggttcaattaccatgaggggtgtcgccaatattgaaacggtttctaataaaggc
agacaggataaagaagcgattattgtcaccgagttaccctatcaaactaataaagcggca
ttgattgaaaaaattgctgaattagtaaatgataaaaaaattgatggtatttctgatatc
cgagatgaaagcgatcgcaacgggatgcgtattgtgattgaattgaaacgggatgcttac
cctagagttgttttaaataatttatataaacaaacggctattcaaagcaattttggggca
aatatgttggctttagtgaataatgagccacaattattaacaattcgcaagtttttagaa
gttttcctcgaatttcgtgtcgaaacgattatcagacgcactcgttatttactcaaaaaa
gccgaagaaagagatcatttattacaaggcttattaatcgcacttaataatctcgatgcg
gtgattagaattattcgaggtgcagcagatacggcaacggcaaaacaagagttaatcact
aattttgaactttcggaaacccaagccgatgctattttacagatgcaattacgccgttta
acagcccttgaagcggaaaaaatcgaagctgaacatcaagacttaatgacccaaattatt
gatcttaatgatatattagctcgaaaagaacgaattgacactattattgaggcggaatta
gcggaaattaaaactcttcatgctactcctagacgtacagaaattgtccaaaatgacggt
gatttaggagatatagatttaatcgctaatgagcaagttgtgattttattgacgaaacaa
ggctatttgaaaaaaatgctcgtcaatacttttgaagcccaaaatcgagctaccagaggc
aaatctggggcaaaaattaaagacgatgatgtcattgaacatttcttcacaggatgcgat
catgatcgagtattattctttagtgataaaggagtcgtgtatggacttagtgcttatcaa
ataccttcaagttctcgtactgcaagaggtgttcccatcgtacaactattacccgttgcc
agtgatgagaaaattacttcaatcatacccgtaagcgagtttactgatcatgaatattta
gtaatgcttaccaaaaaagggtttatcaaaaaaactgctctttctgcttttgggaatatt
cgtagtaacggtttaattgccatttctttagaggataatgatgaattgcgttgggtaaga
ttagcaacggaagatgatagtattctcatcggttctcgtcgtggtatggcgattcatttc
catgctgataatcaacaattacgccctctcagtcgtacagcaaaaggcgttaaatcaatg
aaattgcgtaccggtgatcaaattatcagtatggatattttaccttctcaagtcgtagca
aatatcgctgaagcgggagaaaatgacgatgaggaaaatattgatattgaaaatgaagaa
gaactaactaatgataccagtaaagatgctccttgggctttagcagtgacgactagcggt
tatgggaaaagagtgcctgttactcaattccgtttacaaagacgggctggtattggagtc
aaagctattcgtttccgtaaaccgaaagaggaattagccgctttacatatcgttaatggt
gatgatgagtttatgattattactactcgtggtattattatccgttgtgatgtcaatgct
gtttctctccaatctcgtaatgctagtggagtaagggtacaaaaactcgattctgatgat
gcgatcgcaggtattgcattagtaccaccatcagaagaaggggaagagtcagtgataacc
gaagaataa
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