Geminocystis sp. NIES-3708: GM3708_243
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Entry
GM3708_243 CDS
T04168
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gee
Geminocystis sp. NIES-3708
Brite
KEGG Orthology (KO) [BR:
gee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gee03016
]
GM3708_243
Enzymes [BR:
gee01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GM3708_243
Transfer RNA biogenesis [BR:
gee03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GM3708_243
Prokaryotic type
GM3708_243
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BAQ59837
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Position
284210..285094
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AA seq
294 aa
AA seq
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MDGFLNLNKPQNFTSHDCVAKLRKILKTKKIGHGGTLDPLATGVLPIAIGKATRLLQFLP
TGKAYQAKIRFGIVTTTDDLEGDIIKKTSAFDLTLEKITPYLQDFIGKIQQTPPAYSAIK
KEGKKLYELARKGEIIDIPKREVEITKIDILDWVNGEFPELDLQVFCGSGTYIRSIARDL
GEKLGTGATLSALNRTLSCGMIIENSLDFEDITSQKKTSDFKLINLDYPLENLSMINLNE
DESKRWCQGQKIVINNNVDNQFYRTYNYLCEFIGISELKMDENIKLIKPKVVIN
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggatggttttctaaacttaaataaaccgcaaaatttcacttctcatgattgtgttgct
aaattaagaaagattttaaaaaccaaaaaaatcggtcatggtggtactttagatccttta
gctacgggtgttttacccatcgccattggtaaagctactagattattacaatttttacca
acagggaaggcttatcaagctaaaattagatttggaattgttaccactaccgatgattta
gagggagatattatcaaaaaaacttcagcttttgatttaactttagaaaaaattactcct
tatttacaagattttatcggtaaaattcagcagactcctcctgcttatagtgccataaaa
aaagaaggtaaaaaattatatgaattggcgagaaaaggggaaataatagatataccaaaa
agagaagtagaaataactaaaattgatattttagactgggtaaatggagaatttcctgaa
ttagatttacaagtgttttgcggtagtggcacttatattagatctatagcgcgcgattta
ggagaaaaattaggtacaggtgcaactttatccgctttaaatcgaactcttagctgtgga
atgatcatagaaaatagcttagattttgaagatataacttcacaaaaaaaaacaagtgat
tttaaattaattaatcttgattatcccttagaaaatttatctatgataaatcttaatgaa
gatgagagtaaaagatggtgtcaaggacaaaaaatagttattaataataatgtagataat
cagttttatcgtacttataattatctttgtgagtttattggtatcagtgaattaaagatg
gatgaaaatataaaattaataaaaccaaaagtagttattaattaa
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