Geminocystis sp. NIES-3708: GM3708_2866
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Entry
GM3708_2866 CDS
T04168
Name
(GenBank) cyanobacteria-specific RpoD-like sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
gee
Geminocystis sp. NIES-3708
Brite
KEGG Orthology (KO) [BR:
gee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gee03021
]
GM3708_2866
Transcription machinery [BR:
gee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GM3708_2866
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
RBD_LARS1
Stathmin
Motif
Other DBs
NCBI-ProteinID:
BAQ62460
UniProt:
A0A0D6AIC8
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All DBs
Position
complement(3149849..3150847)
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AA seq
332 aa
AA seq
DB search
MSTAKVTAKINDIDKRKVNTVDMVRTYLQEIGKVPLLSHEQEIIFGKQVQHMMALYNVQE
NLTEKLGRQPSIEEWSNAVNKTPNEIKKIIHQGKRAKQKMIEANLRLVVAIAKKYQKRNM
EFLDLIQEGSLGLERGVEKFDPTKGFKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEK
LNKIKKTQRELSQKLGRSPSPNEIAIALELEPAQIREYFSIARQPISLDVKVGDNQDTEL
SELLEDDGISPDAYITQELMRQDLHKLLGELTPQQQQVVKLRFGLEDGKELSLAKIGQRM
SISRERVRQLEQQALAHLRKKRSSVKEYIVAN
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgccaaagttaccgctaaaataaacgacattgataaacgcaaagtcaataca
gtagatatggtgcgtacctatctgcaagaaatcggtaaagtccctctgttaagtcatgag
caggaaattatttttggaaagcaagtacagcacatgatggctttgtacaatgtacaggaa
aatttaactgaaaaattaggtcgtcaaccgagtatcgaagaatggtctaatgctgtcaat
aaaacccctaatgaaatcaaaaaaattattcatcaaggtaaacgcgccaaacaaaaaatg
attgaggcaaatttacgtttagtggtggcgatcgctaaaaaatatcaaaaaagaaatatg
gaatttttagacctaatccaagaagggagtttaggtttagaaagaggtgtggaaaaattt
gatcctactaaaggcttcaagttttctacttatgcttactggtggattcgtcaagctatt
acccgtgccatcgctcaacaagcgagaactattcgtttaccaattcatattacagagaaa
ctcaataaaatcaaaaaaactcagagggaattatctcaaaaattaggtagaagcccatcc
cccaatgaaatcgccatagctttagaattagaacctgctcaaatcagggaatatttcagt
atagcccgtcaaccgatttctttagatgttaaagtgggggataatcaggataccgaatta
tctgaattgttagaagatgatggtatttctcctgatgcttatatcactcaagaattgatg
cgtcaagatttacataaattgttaggagaattaacacctcaacagcaacaagtagtaaaa
ctaagattcggtttagaagacggtaaagaactatctttagccaaaatcggtcaaagaatg
agtattagtagagaaagagtacgtcaattagaacaacaagcattggcacatctacgaaaa
aaacgtagtagtgtaaaagaatatattgtcgctaattaa
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