Geminocystis sp. NIES-3708: GM3708_331
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Entry
GM3708_331 CDS
T04168
Name
(GenBank) heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gee
Geminocystis sp. NIES-3708
Pathway
gee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GM3708_331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gee03019
]
GM3708_331
03110 Chaperones and folding catalysts [BR:
gee03110
]
GM3708_331
03029 Mitochondrial biogenesis [BR:
gee03029
]
GM3708_331
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gee04147
]
GM3708_331
Enzymes [BR:
gee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GM3708_331
Messenger RNA biogenesis [BR:
gee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GM3708_331
Chaperones and folding catalysts [BR:
gee03110
]
Heat shock proteins
HSP60 / Chaperonin
GM3708_331
Mitochondrial biogenesis [BR:
gee03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GM3708_331
Exosome [BR:
gee04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GM3708_331
Exosomal proteins of other body fluids (saliva and urine)
GM3708_331
Exosomal proteins of breast cancer cells
GM3708_331
Exosomal proteins of colorectal cancer cells
GM3708_331
Exosomal proteins of bladder cancer cells
GM3708_331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
Motif
Other DBs
NCBI-ProteinID:
BAQ59925
UniProt:
A0A0D6AB17
LinkDB
All DBs
Position
380091..381767
Genome browser
AA seq
558 aa
AA seq
DB search
MSKIVSFKEESRRSLEQGVNALANAVKVTLGPKGRNVLLERKFGAPEIVKDGISVAKEVE
LENPLQNVGARLVREVASKTKDIAGDGTTTATVIAQAMIHEGLKNVTAGANPVALRRGID
KAISFLIKEIEAVAQPVEGDAISQVATVSAGNDEEIGEMIATAMDKVTKDGVITVEESKS
LATELEVVEGMQIDRGYVSPYFITDQEKQIVEFENPLILITDKKISAIADLVPVLENVAR
SARPLLIIAEDIDGEALATLVVNKARGVLNVAAIKAPSFGDRRKAALEDIAILTGGRVIS
EDIGLSLDTVSLDHLGKAHKITIEKDNTIIVADGGNKADIEKRVAQIRTQLAETDSDYDA
EKLKERIAKLAGGVAVIKVGAATETELKERKLRIEDALNATKAAVEEGIIAGGGSTLIHL
ASKVETFKNTLTIEEEKIGAQIVIKAIEAPLRQIANNAGVEGSVVVERVKQSALNFGYNA
LTGEYQDLIAAGIIDPAKVVRSSLQNAASIAGMILTTEALVVEKPEPQAPAMPDMGGMGG
MGGMGMPGMGGMGMPGMM
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaatagtatcatttaaagaagaatccagaagatctttagaacagggtgtcaat
gctttggctaatgctgttaaagtaactttaggacctaaaggtagaaatgttttattagaa
agaaaattcggtgccccagaaatagttaaagatggtatcagcgttgccaaagaagttgaa
ttagaaaatcccttacaaaatgttggtgcaagattagtcagagaagtagcttctaaaact
aaagacatcgcaggagacggcacaactacagctaccgttatcgcccaagctatgattcat
gaagggttgaaaaatgttactgctggagcaaatcctgtggctttacgtcgtggcattgat
aaagccattagtttcttaattaaggaaattgaagctgtagcacaacctgtagaaggtgat
gctattagtcaagttgcaacagtttcagccggaaatgatgaagaaatcggcgaaatgatt
gctactgccatggataaagtcaccaaagatggtgtgattaccgttgaagaatctaaatcc
ttagccactgaattagaagttgtcgaaggtatgcaaattgatcgtggttatgtttctcct
tactttatcactgatcaagaaaagcaaatcgttgagtttgaaaatcctttaatcctcatc
actgataaaaaaattagtgccattgcagatttagtacctgtattagaaaatgtagcacgt
tctgctcgtcccttattaatcattgctgaagatattgacggtgaagccttagccaccctt
gtcgtcaataaagctagaggtgttttaaatgtagccgctatcaaagctcctagttttggc
gatcgcagaaaagcagcgttagaagatattgctatcttaactggtggaagagttatttcc
gaagacattggtttaagccttgatactgttagcttagatcatttaggtaaagctcataaa
attaccatcgaaaaagacaatacaattattgtagctgacggtggcaataaagcagacatt
gagaaaagagtagctcaaattcgtacacaattagccgaaactgattctgactatgacgca
gaaaaattaaaagagcgcatcgcaaaattagctggtggtgtggcagtgattaaagtaggt
gccgctaccgaaactgaattaaaagagcgtaaactacgtattgaagatgctttaaacgca
actaaagcggcagtagaagaaggaattatcgctggtggtggttcaacattaattcattta
gcgagtaaagttgaaaccttcaaaaacactttaaccattgaagaagaaaaaattggtgca
caaatcgttatcaaagccatcgaagcacctttacgtcaaatcgctaataatgctggagta
gaaggctctgtagtggtagaacgtgtcaaacaatcggctcttaatttcggttataatgcc
ttaacaggagaatatcaagacttaattgctgcgggaattattgatccagctaaagtagta
cgttcttccttacaaaatgcggcttctattgcagggatgattttaaccactgaagccctt
gttgtagaaaaacctgagcctcaagcccctgcaatgcctgatatgggtggcatgggtggt
atgggcggtatgggtatgcccggcatgggtggcatgggtatgcccggtatgatgtaa
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