Geminocystis sp. NIES-3708: GM3708_3334
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Entry
GM3708_3334 CDS
T04168
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gee
Geminocystis sp. NIES-3708
Brite
KEGG Orthology (KO) [BR:
gee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gee03032
]
GM3708_3334
03400 DNA repair and recombination proteins [BR:
gee03400
]
GM3708_3334
Enzymes [BR:
gee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GM3708_3334
DNA replication proteins [BR:
gee03032
]
Prokaryotic type
DNA Topoisomerases
GM3708_3334
DNA repair and recombination proteins [BR:
gee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GM3708_3334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BAQ62928
UniProt:
A0A0D6AJC9
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Position
complement(3694205..3696856)
Genome browser
AA seq
883 aa
AA seq
DB search
MSTLVIVESPTKAKTIRNYLPKDYQVEASMGHIRDLPSSAEEIPAEYKQFDWARLGVNIE
NNFEPIYVIPKGKNKTVQQLKQALKSADELILATDEDREGESISWHLLQLLKPKVPIKRM
VFHEITKDAIQKALNNCRDIDENLVHAQETRRILDRLVGYTLSPLLWKKIAAGLSAGRVQ
SVAVRLLVQRERERRAFKEAQYWDLKALLNHDKTDFEGKLTTLKGQKLANGSDFDPKTGK
LIKNKKVIVLNEQEATELKACLKGKTWEVTDTEEKATIRKPSPPFTTSTLQQEANRKLGL
GAKDTMRIAQSLYENGYITYMRTDSVHLSDQAIAAARSCVEEMYGREYLSPQPRQYKTKA
KGAQEAHEAIRPAGSTFRIPKETGLRDKELGLYDLIWKRTVACQMADAKLTQIVVNIAVE
DAIFRSSGKRIDFAGFFRAYVEGSDDPEAALENQEVILPNLQKGDKPKCKQLDVLNHETQ
PPTRYTEASLVKTLESEGVGRPSTYASIIGTIVDRGYAQLRNKALIPTFTAFAVISLLEK
NFAELVDTKFTSKMEQSLDDIASGNEKWLPYLDKFYRGENGLQNQVKVRETDIDPQTAKA
IELENLDVTVKIGKFGAYFEANYGDEVVKSSIPADLTPSDLDPKQIEILLKQKVEGPPIL
GIHPETQDPIYLLIGTYGPYVQLGDTPQGKAKKPKTASFPKGVNAEDITLEMAIGYLTLP
RTLGEHPETGKPIKTSLGRFGAYVVHDQGTEGKEYRSLKKEDDVLTISLERALELLAQPK
TTRGRRGATTKAALKELGLHPDDNEPVNIYQGPYGVYFKHGKTNVKLPEGETVESMNLEK
ALLLLQDKTPTKKTATKKTTTAKKTTTKKTTTTRKTTAKKTTK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactttagtcatcgttgaatcacctaccaaagccaaaaccatccgtaactatctg
cccaaagattatcaggtagaggcatctatggggcatattcgagatttaccttcctctgct
gaagaaattccagctgaatacaaacagtttgattgggcaagattaggagttaatattgag
aataattttgagcctatctatgttattcctaaaggtaaaaataaaacagttcaacagttg
aaacaagccttaaaatctgctgatgaattaatattagcaaccgatgaagatagagaaggg
gaaagtattagttggcatttattacagctattaaagcctaaagtgcctatcaagcgtatg
gtttttcacgaaattactaaagatgccattcaaaaagccttgaataactgtcgtgacatt
gatgaaaatttagtacacgcccaagaaacacgacgtattctcgatcgccttgtgggttat
actctctcgcctctactatggaaaaaaattgcggcaggattatcagcaggtagagtacaa
tctgtcgccgtacgtttattagtacaacgagaaagagaacgaagagcatttaaggaagct
cagtattgggatttaaaagcattacttaaccatgacaaaactgactttgaagggaaatta
actactttaaaaggtcaaaaactggcaaatggtagcgattttgatcctaaaacgggaaaa
ttaatcaaaaacaagaaagtaattgtactaaatgaacaagaagctacagaattaaaagct
tgtttgaaaggcaaaacatgggaagtaaccgataccgaagaaaaagctactatccgtaag
ccctcccctccttttactacctcaactttacaacaggaagctaaccgtaaactgggatta
ggtgcaaaagatactatgcgcattgctcaaagtctttatgaaaatggttatattacctac
atgagaactgactcggtacatttgtccgatcaagcgatcgccgctgctcgtagttgtgta
gaggaaatgtatggtagagaatatttaagtcctcaaccaagacaatataaaactaaagct
aagggggcacaagaagcccatgaagccatacgccctgctggtagtacttttagaattccg
aaagaaacaggattgagagataaggaattagggttatatgacttaatttggaaacgcacg
gtagcctgtcaaatggcagatgctaaattaacccaaattgtggtaaatatcgccgtagaa
gacgcaatttttcgatcttcaggaaaaagaatcgattttgctgggttttttagagcctat
gtagagggtagtgatgatcctgaagcagcgttagaaaatcaagaggtaattttacctaac
ttgcaaaaaggtgataagcctaaatgtaaacaattagatgtacttaaccatgaaactcaa
cctcccacccgttatacggaagcatctttagtcaaaacattagaaagtgaaggggtaggg
cgaccaagtacttatgctagtattattggtacgatcgttgatagaggttatgctcaatta
cgcaataaagcactaataccaacttttactgccttcgccgttatttctttattagaaaaa
aattttgctgagttagttgatactaagtttacgtcaaaaatggagcagagtcttgatgac
atcgcttcaggtaatgaaaaatggttgccttacctagataaattttatcgaggagaaaat
ggcttacaaaatcaggtgaaggtgagagaaacagacattgatcctcaaacagcaaaagcc
atagaattagagaatcttgacgttaccgtgaaaataggcaagtttggggcttattttgaa
gcaaattacggtgatgaagttgtaaaatcttctattcccgccgatcttaccccttcagat
ctcgatcctaaacaaatagaaatattattgaaacaaaaagtagaaggaccacctatattg
ggaattcaccctgaaacacaagatcctatttatttgttaatcggcacttatggtccttat
gtacaattaggagatacaccccaaggcaaagctaaaaaacccaaaacagcttctttccct
aaaggtgttaatgctgaagatattactttagaaatggcgatcggttacttaactttacct
cgcacattaggggaacatccagaaacaggaaagccgataaaaaccagtttaggacgtttt
ggggcatatgttgtccatgatcaaggtacagagggcaaagagtatcgctccttgaaaaaa
gaagatgatgtcttaactatttctcttgaacgtgcattagaattattagcacaacctaaa
accacaagaggaagaagaggtgcaacgacaaaagcagcactcaaagaattgggattacac
cctgatgataatgaaccagtgaatatttatcaaggtccttatggggtatattttaaacat
ggtaaaactaatgtcaaattaccagaaggtgaaaccgtagaaagtatgaatttagagaag
gctttattacttttacaagataaaactcccactaaaaaaactgcgactaaaaagacaaca
accgcaaaaaaaactactacgaaaaaaacgactactaccagaaaaactactgctaaaaag
acaactaaataa
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