Geminocystis sp. NIES-3708: GM3708_731
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Entry
GM3708_731 CDS
T04168
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gee
Geminocystis sp. NIES-3708
Pathway
gee03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gee00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GM3708_731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gee03021
]
GM3708_731
03400 DNA repair and recombination proteins [BR:
gee03400
]
GM3708_731
Enzymes [BR:
gee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GM3708_731
Transcription machinery [BR:
gee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GM3708_731
DNA repair and recombination proteins [BR:
gee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GM3708_731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BAQ60325
UniProt:
A0A0D6AC55
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All DBs
Position
complement(819024..820013)
Genome browser
AA seq
329 aa
AA seq
DB search
MAVFKIDCLVNKTQKNQGQYGKFVLDPLERGQGITLGNSLRRVLLSNLEGAAVTAVRIAG
VNHEFAVVEGVREDVLEIMLNMKGIVFKSYTHTAQIGRLVATGPCTVTAAQFDLPSEIEV
VEPSQYICTLGKGAKLEMEFRVEKGKGYRAIQKGKDESSSLDFLQIDSVFMPVNKVNFTV
EEIRFEGDLADRLILEIWTNGSIKPEEALSDASKILVELFSPLTDATGITGKPEEPEEPE
DPASQIPIEELNLSVRAYNCLKRAQINTVADLLEYSQDDLLEIKNFGQKSAEEVIEALQQ
RLGITLAEGKIKEPPSGDLIESAEPVATP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtggctgtgtttaaaatagactgcttagtaaataaaactcaaaaaaatcaagggcaatat
ggaaagtttgtactagatcccctagaaagaggacaaggtataactcttggtaattccttg
agaagagttcttttatctaacttagaaggtgcagcagtaactgccgtcagaattgcgggt
gtaaaccacgagtttgcggttgtggaaggggtgagagaagacgtgttagaaataatgctc
aacatgaaaggaattgtttttaaaagctatacccatacggctcaaattggtcgtttggta
gctacaggtccttgtactgttacagccgcacagtttgatctaccttcagaaatagaagta
gtcgaacctagtcagtatatttgtaccttggggaaaggggcaaagttagaaatggaattt
cgagtcgagaagggtaaaggttatcgtgccattcaaaaaggtaaggatgaaagtagttct
ctcgactttttgcagatcgattctgtgtttatgcctgtaaataaagttaacttcacggta
gaagaaatccgttttgaaggagatttagctgatcgcctaattttagagatttggacaaat
ggcagtattaaaccagaagaagctctttctgatgcgtcgaaaattttagtggagttattt
tcacctttaaccgatgcaacaggtatcacaggtaaacctgaagaacccgaagagcctgaa
gatccagcaagtcaaattcctattgaagaactaaatctgtcggttcgtgcttataactgt
ctcaaacgagctcaaattaacactgtagctgatttgttagagtattctcaggatgatctc
ttagaaattaagaatttcggtcaaaaatcggcagaagaggtaatagaagctctccaacag
cgtctaggcatcactttagcggaaggcaagattaaagaaccaccttctggagatttaatc
gaaagtgctgaacctgttgcaacaccttag
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