Geminocystis sp. NIES-3708: GM3708_767
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Entry
GM3708_767 CDS
T04168
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
gee
Geminocystis sp. NIES-3708
Pathway
gee02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gee00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GM3708_767
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gee02000
]
GM3708_767
Transporters [BR:
gee02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GM3708_767
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
SbcC_Walker_B
ABC_ATPase
AAA_29
AAA_5
RsgA_GTPase
AAA_16
AAA_22
AAA
Nod1
MMR_HSR1
DUF815
AAA_7
ResIII
DUF3147
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BAQ60361
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Position
complement(847503..849302)
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AA seq
599 aa
AA seq
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MQINVKENDWGLLLKIAPYAKRNSSILLISLILLIPLSLAGAVQPLLVGQAISLLRNEPT
WSFLKSYSVSNGLNVLAFILLLTIIIRTIFQAWQGFLVQKVGQEITAFIREDLFNHVTSL
GSNFFNKTPVGKLVTRITNDVEALGDVFATGAIGILSDLVSILVIILTMFSLQWQLASML
VLMLIPVTALIIYFQKQYRIANYAAREELSLLNSMLQENVVGINIVQLFRREKYNSEMFR
NVNYRYLKAIDKTIFHDSAVSATLEWISLVAIAGVLWVGGLFILEDKLTFGILSAFILYS
QRLFDPLRQFADKFTMFQSGFTAIERITELMSIPLEIKDREDNISFNIDQENQQIGEIKF
ENVWFAYKPDEYVLKNLDFTIKPGEKVALVGPTGAGKSSIIRLLCRLYEPTKGRILVDGI
DIKDINQKELRSHIGVILQESFIFAGDVKRNITLGEEYSFEKIKQAAEITNIDKFINQLP
QGYDTQLRERGANLSGGQKQLLAFARVAIRNPNILVLDEATSSLDVATEADTQQALDKLL
VNKTAIIIAHRLSTIRNVDKILVLKHGELIESGSHDQLLIQNGLYSSLYKLQMLATTES
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcagataaatgtcaaagaaaatgattggggattactgttaaaaattgccccttatgct
aaacgaaattcctctattttattaatttctttaattttattaattcctttatctttagca
ggtgcagttcaacctcttcttgtaggacaagcaatctcactgttaagaaatgaacctaca
tggtcatttttaaaatcttattctgtctctaatggattaaatgtattagcttttatttta
cttttaactattattattagaactatttttcaagcgtggcaaggatttttagtacaaaaa
gtcggacaagaaataacagcatttattcgagaagatttatttaatcatgttacttcttta
gggtctaatttttttaataaaactcccgtcggaaaattggtaacaagaattactaatgat
gtggaagcattaggagacgtttttgctacaggtgcaattggtattcttagtgatttagtt
tctattttagttattattttgacaatgttttctcttcaatggcagttggcttctatgttg
gtattaatgttgattcctgtcacagctttaattatctattttcaaaaacaatatcgtatt
gcaaattatgcggcaagggaagaattgtctttacttaactctatgttgcaggaaaatgtt
gtgggtattaatatcgtgcaattatttcgacgagaaaaatataatagtgaaatgttccgt
aatgttaattatagatacttaaaagccattgataaaaccatttttcatgactccgcagta
tctgctactttagaatggatttctttagtggcgatcgcaggagtattatgggtaggagga
ttatttattttagaggataaactaacatttgggatattgtcagcttttattctttattct
caaagattattcgatcctttgcgtcaatttgcggataaatttaccatgtttcaatcggga
tttactgctattgaaagaattactgaattgatgagtattcctttagaaattaaagatcgt
gaagataatattagctttaatatcgatcaagaaaatcaacaaattggcgaaataaaattt
gaaaatgtttggtttgcttataaacctgatgaatatgtcttaaaaaatcttgactttacc
attaaaccaggagaaaaagttgctttagtaggtcctacaggtgcgggaaaaagttctata
attcgtttattatgtcgtttatatgaaccaacaaaagggagaattttagttgacggtatt
gacatcaaagacattaatcaaaaagaattaagaagtcatattggtgtaattttacaagaa
agttttatctttgctggtgacgtgaaacgtaatatcactctaggagaagaatattccttt
gaaaaaataaaacaagccgccgaaattaccaatattgataaatttatcaatcaattaccc
caaggatatgatactcaattaagagaaagaggagcaaatctttctggtgggcaaaaacaa
cttttagcctttgctagagtcgccattcgtaatcctaatatacttgtgttggatgaagcc
acttcaagtttagatgttgctactgaagcagatactcaacaagccttagataaactttta
gttaataagactgctattattatcgctcatcgtctttcaaccattcgcaatgtggataaa
attttggtattaaaacatggagaattaatcgaatcgggcagtcatgatcaattacttata
caaaatggattatactctagtttatataagttacaaatgttggctactacggaaagctaa
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