KEGG   Geminocystis sp. NIES-3708: GM3708_787
Entry
GM3708_787        CDS       T04168                                 
Name
(GenBank) type I restriction-modification system
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
gee  Geminocystis sp. NIES-3708
Brite
KEGG Orthology (KO) [BR:gee00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gee02048]
    GM3708_787
Enzymes [BR:gee01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     GM3708_787
Prokaryotic defense system [BR:gee02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   GM3708_787
SSDB
Motif
Pfam: EcoEI_R_C ResIII HSDR_N SWI2_SNF2 MerR_1 DEAD Helicase_C Phage_Nu1 MerR UvrD-helicase DUF4864
Other DBs
NCBI-ProteinID: BAQ60381
UniProt: A0A0D6AC54
LinkDB
Position
872808..876014
AA seq 1068 aa
MFLTTKTTSQITGCTLRQLQYWREQGLVVPEVDATGKGRSVFYTRENLVVLMVMQKLLSG
GLDYSQACAGLEALKERDPHFTDSNIQSRYLLSHDDDHTMVIMDFEINNIEQCLKKGCAV
IPIWLDEIHSSLTEKLDQVSSQEIDHQEIRQKAQQMESEATTRKNRIDQILSALGWNIVD
YTPDLDSSQLVNHGVREYPLTTGRADYVLFVNGLLVGIIEAKKILIEPLSALEQAKRYSK
GAFEGIGNWEGYRVPFLYSSNGQLIYFLDVREKFNLAREISSFHTPNGLAELLKRKVSFS
FEWLENNPIEQNEHLRPYQVEAIASIEKAIAEGRRELLVAMATGTGKTFMIVSSIYRLLV
SKRVKRVLFLVDRRALAAQAVRAFASFSTPNGKKFDQEYEVYSQQFQQEDFGEEDKFNSK
VLPNKYLTDPSEVHTFVYVSTIQRMKLNLFGNANNHVILNDSEESERFLDKFKKTEKSEN
VIVTDDSGDCEFEDGVEQLPIPIHAFDLIISDECHRGYTASENGYWRRVLDHFDAIKIGL
TATPAIHTLNLFKEVVFRYSTEQAIADGYLVDYEQVNINSEVTINGAFLREGEMVTRVDQ
ETGENFYDQLEDEREFNATDIERKITVPDRTRKIIQEIAKYAEQHEQETGRFPKILIFAC
NDLEHTSHANQVVSICKEVFNRGDDFVQKITGKVDRPLQKIREFRNRPKPAIAVTVDLLT
TGIDIPAIEFVVFMRFVKSRILWVQMLGRGTRLCKDIDKTHFKVFDCFNGSLVEYFADTT
DFRFVPPRQQAMPLSQLVGNIIYDVDRERHLDMLNRRLHRVDRSIATEAREQLDLYLNGA
SNKGLARTFQDLFDEQPEEALSLLQDQEFIDFLEDYPRRRATFLIAEEVEDTVTSEVVVQ
GQKPEDYLTAFYRFVEENSEQIEALQILRQRPQDWGVEALEELRSKLKEHRFTEDNLQRA
YKLVHQKALADIISLIRSAFDHSYPVYTAEERVERAIASVTDGKQFTDEQLEWLGYIKQH
LIQNLSIDLDDFEYAPIFELHGGKIKAQQVFFQDLQDLVKILNHQIAL
NT seq 3207 nt   +upstreamnt  +downstreamnt
atgtttcttaccactaaaacaacttcacagataactggttgtactttgcgtcaattgcaa
tattggcgagaacagggattagtagtaccagaggtagatgcaacaggaaaaggacgtagt
gtattttacaccagagaaaatttagtagttttaatggtgatgcagaaattattgtctggg
ggattagattattctcaggcttgtgctggattggaagcgcttaaagaacgagatccccat
tttacggattcaaatattcaaagtcgttatctcttatctcatgatgatgatcacacaatg
gtaattatggattttgagattaataatatagaacaatgcttaaaaaaaggatgcgctgtt
atccccatttggttagatgagattcattcttctttaaccgaaaaactagatcaagtttct
tctcaagaaatcgatcatcaagaaataagacaaaaggcacagcaaatggaatcagaagct
actaccagaaagaatcgtatcgatcagattttatcggctttaggatggaatatagtggac
tatactcctgatcttgatagctctcaattagtcaatcatggggtaagagaatatccttta
actacggggagagcagactatgttttatttgtgaatggcttattagtaggaattattgaa
gcgaagaaaatattgatcgagccattatcggcattagaacaggcaaaacgttattcaaaa
ggtgcatttgaaggcatcggaaattgggaaggttatcgagttccatttctgtactctagt
aatgggcagttaatttatttccttgacgtgcgagaaaagttcaatttagctcgtgaaatt
agttcttttcatacccccaatgggttggcagaattattaaaaagaaaagtatctttctcc
tttgagtggcttgaaaataatccgatcgaacaaaatgagcatttaagaccataccaagta
gaagcgatcgcatccattgaaaaagctatagccgaagggcgacgagaattattggtggcg
atggcaacaggtacaggaaaaacttttatgatcgtttcttctatttatcgtctattggtt
tctaaaagggtgaaacgggtattgtttttagtcgatcgcagggcattagctgcacaagca
gtgagagcgtttgcgtccttttcgactcctaatggaaagaagtttgatcaagagtacgag
gtttatagtcaacaatttcaacaggaagattttggagaggaagacaagtttaattccaaa
gtactaccgaataagtatttgactgatccttcagaagttcatacttttgtgtatgtatca
actattcaaaggatgaaactcaatttgttcgggaatgctaataatcatgtcattctgaac
gatagtgaagaatctgagagattcctcgacaagttcaaaaagacagaaaaatcagaaaat
gtcatagtgacagatgatagtggagattgtgaatttgaagatggtgtggaacagttgcca
atccctattcatgcctttgatctcattatctctgacgagtgtcatcgaggttatactgcc
agtgaaaatggttattggcgaagagttttggatcattttgatgccattaagattggttta
acagccactcctgccattcataccctgaatctttttaaagaggttgtttttcgttacagt
acagaacaggcgatcgccgatggttatttagtggactatgagcaggttaatattaactcg
gaagtgactattaatggtgctttcctaagagaaggagaaatggttacaagggtcgatcaa
gaaacaggagagaatttttatgatcaattagaagatgaaagagaatttaatgctactgac
atagaacgtaaaataacagtacccgatcgcactcgaaaaattattcaagaaattgctaaa
tatgccgagcaacatgaacaagaaacagggcgttttcccaaaatattaatatttgcttgt
aacgatttagagcatacttcccacgctaatcaggtggtttctatttgtaaggaagtcttt
aacaggggagatgatttcgtccaaaagattacggggaaagtcgatcgccccttacaaaaa
ataagggagtttcgtaaccgtcctaaacctgccattgccgttacagtggacttattaact
acgggtatcgatataccagccattgagtttgtggtgtttatgcgatttgttaagtctcgt
attctttgggtgcagatgttgggaaggggtacaagactatgtaaagacatagataaaact
cattttaaggtgtttgattgttttaatggctctctagtagaatattttgcggataccact
gattttcgctttgtgcctccccgtcaacaggctatgcctttaagtcagcttgtgggtaat
attatctatgatgtcgatcgagaacgtcatttggatatgttaaatcggcggttacacaga
gtcgatcgcagtatcgccactgaagcgagagagcaattagatttgtatttaaatggtgct
agtaacaaagggttagctcgaacttttcaagacttatttgatgaacaaccagaagaagcc
ctttcattattacaagatcaagaatttatagattttctggaagactatccccgtcgcaga
gctacttttttaattgcggaggaggttgaggatactgttacatcggaagtggtggtgcag
gggcaaaagccagaggattacttaacggctttctaccgttttgtcgaggagaatagcgaa
cagatagaggcgttacagatattgcgtcaacgcccccaagattggggagtagaagcctta
gaggagttaagaagtaagttgaaggagcatcgttttacagaggataatttacaaagggct
tataagttagtccatcaaaaggctttagctgatattatttctttgatccgttcggctttt
gatcattcttatcctgtttataccgcagaagaaagggtagaaagggcgatcgcatctgtg
actgatgggaaacagtttaccgatgagcaattagagtggttgggttatatcaagcaacat
ctaatccagaatctcagtatcgatttagatgactttgaatatgcccctatctttgaattg
catggggggaaaatcaaagctcaacaagttttctttcaggatttacaggatttagtaaaa
atactaaatcatcaaattgccttgtag

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