Geobacter sp. FeAm09: FO488_02275
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Entry
FO488_02275 CDS
T07988
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
gef
Geobacter sp. FeAm09
Pathway
gef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FO488_02275 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gef03019
]
FO488_02275 (pcnB)
Enzymes [BR:
gef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FO488_02275 (pcnB)
Messenger RNA biogenesis [BR:
gef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FO488_02275 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QEM67101
UniProt:
A0A5C1M9Z3
LinkDB
All DBs
Position
491233..492603
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AA seq
456 aa
AA seq
DB search
MKKEKSRSVIIARQEHGVSRKLMSPNALRTLYRLRDNGFFGYLVGGCVRDLLLGREPKDF
DVVTNATPSEVKRLFRNCRLVGRRFRLAHIHFQDEVIEVATFRSQVSNEPESEPKEASGS
ERRQRPPRMLKDDDGMILRDNVYGTPEEDALRRDFTINSLSYNIADFSIIDYAGGLADLN
AGIVRTIGDPAVRFQEDPVRMLRAVRFAAQLAFTIEEHTLKALVAATDTIVRAAPPRLYD
EVLKLFLSGAGATCYGLLRQTGLFAALFPCFSNWLNAESEGFPHARFGEMLCQVDSRIQQ
GGMVSPPLLLALLFGEYIDGKAAHFRRQGVPWQQSVNAAVAEFMGETCPIVMITNRVGLA
LRDIISQQMRLKKIPGRRPESFIARHDFNDIVDYCRATCGGTRDVVKQLDWWAARAMQQA
SVSLPSRLTEEAGAPQRKRRKRRRRNPQVKNRTEGV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggaaaagagccgttcggtgatcatcgcccgccaggaacatggggtctcccgc
aaactcatgagcccgaacgccctgcgcaccctctaccgcttgagagataacggctttttc
ggctatctcgtcggcggctgtgtgcgtgacctcctgctcggccgggaaccaaaggatttc
gacgtggtaaccaacgccaccccgtccgaggtgaagcggttgttccgcaactgtcgcctt
gtcgggcggcgttttcgccttgcgcacatccattttcaggatgaggtcatcgaggtggcg
acctttcggtcccaggtttcgaacgagccggagtccgagccgaaagaggcaagcgggtcg
gagcgccggcagcggcccccgcggatgctgaaggacgacgatggcatgatcctgcgcgac
aacgtttacggcacccctgaagaggatgccctgcgccgtgacttcaccattaattcgctt
tcctacaatatcgccgatttctcgatcattgactacgctggaggcctcgccgacctcaac
gccggcatcgtccgcaccatcggcgatcccgctgtccgcttccaggaagacccggtacga
atgctgcgggcggtgcggtttgccgcccaactcgctttcaccatcgaggaacataccctg
aaggcgctggttgccgccactgataccattgtcagggctgcaccgccgcgcctctacgac
gaggtgctcaagctcttcctctcgggggcgggagcaacgtgttacggactcctccgccag
accgggctttttgctgcgcttttcccttgtttctcgaactggctcaacgccgaaagcgaa
ggctttccccacgcccggttcggggaaatgctctgccaggtcgattcccgtatccagcag
gggggcatggtctccccgccgctcctcctggcacttctttttggtgagtacattgacggg
aaggcagcgcatttccgccgacagggtgtgccctggcagcagagcgtcaacgcggcggtt
gcggagttcatgggcgaaacctgcccgatcgttatgatcacgaaccgcgtcggactggcg
ctccgcgacatcatcagccagcagatgcgcctgaaaaagatccccggtcgccggccggag
tcgttcatcgcccgtcacgatttcaatgacatcgtcgattattgccgggcaacatgcggc
ggcacaagggatgtcgtcaaacagctcgactggtgggcggcccgggcaatgcagcaggcg
tcggtgtctcttccttccaggctcaccgaagaagccggggcgccgcaacgaaagaggagg
aaacgccgccggcggaatccgcaggtgaaaaaccggacggaaggggtataa
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