KEGG   Geobacter sp. FeAm09: FO488_08310
Entry
FO488_08310       CDS       T07988                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
gef  Geobacter sp. FeAm09
Pathway
gef00521  Streptomycin biosynthesis
gef00523  Polyketide sugar unit biosynthesis
gef00525  Acarbose and validamycin biosynthesis
gef00541  Biosynthesis of various nucleotide sugars
gef01055  Biosynthesis of vancomycin group antibiotics
gef01100  Metabolic pathways
gef01110  Biosynthesis of secondary metabolites
gef01250  Biosynthesis of nucleotide sugars
Module
gef_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:gef00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    FO488_08310 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    FO488_08310 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    FO488_08310 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    FO488_08310 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    FO488_08310 (rfbB)
Enzymes [BR:gef01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     FO488_08310 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD RmlD_sub_bind Polysacc_synt_2 NAD_binding_4 adh_short NAD_binding_10
Other DBs
NCBI-ProteinID: QEM68163
UniProt: A0A5C1MC26
LinkDB
Position
1756293..1757363
AA seq 356 aa
MPFKPTSILVTGGAGFIGSNFIHSFVAANPGCAVTNLDCLTYAGNLKNLTAVEDNPRYRF
IKGDVCDAALVAAILKERAVDAVVHFAAESHVDRSISGPEIFVRTNVLGTQVLLEESRRH
WQSGAVPDFRYLQISTDEVYGSLGETGYFTEQTPLAANSPYSASKAGADLLVRAYHETYG
MPTLNTRCSNNYGPYHFPEKLIPLMIHNIITRKPLPVYGDGLNVRDWLHVRDHAVAVETV
LKQAAPGSVYNIGGNNEWKNIDIVHLVCDLLDARLGRAAGENRSLVAFVKDRPGHDRRYA
IDASRLKRDLGWEPAYTFEQGIAETIDWYLAHQEWVAEVTSGSYRDYYTQQYGSKQ
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgccattcaagcccacatccattctcgtgaccggaggcgccggcttcatcggctccaac
ttcatccattccttcgtcgccgccaaccccggctgcgccgtgaccaatctggattgcctg
acctacgcgggcaacctgaaaaacctgaccgcggtggaggacaacccccgctaccgcttc
atcaagggggacgtctgcgatgccgcgctggtggcagccatcctgaaggaacgggcggtc
gatgccgtcgtccattttgccgccgaatcccacgtggaccgttccatcagcggccccgag
atcttcgtgcgtaccaacgtgctggggacgcaggtcctgctggaggagagccgccggcac
tggcagtccggggcggtgcccgatttccgctatcttcagatatccacggacgaggtctac
ggttccttgggggaaaccggctatttcaccgagcagacccccctggccgccaactctcct
tattcggccagcaaggccggggcggacctcctggtgcgggcctaccacgaaacctacggc
atgccgaccctcaacacccgctgctccaacaactatggcccctaccatttccccgaaaaa
ctgattccgctcatgatccacaacatcatcacccgcaaaccgctgccggtctacggcgac
ggcctcaacgtgcgcgactggctccatgtgcgggaccacgccgtggcggtggaaacggtc
ctgaaacaggccgcgcccggctcggtctataatatcggcggcaacaacgagtggaagaac
atcgatatcgtccatctggtctgcgacttgctggatgcccggctggggcgcgccgccggc
gagaatcgcagcctggtcgcctttgtcaaggaccgtcccggccacgaccgccgctatgcc
atcgacgcatccaggctgaagcgcgatctgggctgggagcctgcctataccttcgaacag
gggatcgccgaaaccatcgactggtacctggcccatcaggagtgggtggccgaggtcact
tccggctcgtaccgcgactattacacgcagcaatacgggagcaaacaatga

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