Geobacter sp. FeAm09: FO488_08310
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Entry
FO488_08310 CDS
T07988
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
gef
Geobacter sp. FeAm09
Pathway
gef00521
Streptomycin biosynthesis
gef00523
Polyketide sugar unit biosynthesis
gef00525
Acarbose and validamycin biosynthesis
gef00541
Biosynthesis of various nucleotide sugars
gef01055
Biosynthesis of vancomycin group antibiotics
gef01100
Metabolic pathways
gef01110
Biosynthesis of secondary metabolites
gef01250
Biosynthesis of nucleotide sugars
Module
gef_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
gef00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FO488_08310 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FO488_08310 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FO488_08310 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FO488_08310 (rfbB)
00525 Acarbose and validamycin biosynthesis
FO488_08310 (rfbB)
Enzymes [BR:
gef01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FO488_08310 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QEM68163
UniProt:
A0A5C1MC26
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All DBs
Position
1756293..1757363
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AA seq
356 aa
AA seq
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MPFKPTSILVTGGAGFIGSNFIHSFVAANPGCAVTNLDCLTYAGNLKNLTAVEDNPRYRF
IKGDVCDAALVAAILKERAVDAVVHFAAESHVDRSISGPEIFVRTNVLGTQVLLEESRRH
WQSGAVPDFRYLQISTDEVYGSLGETGYFTEQTPLAANSPYSASKAGADLLVRAYHETYG
MPTLNTRCSNNYGPYHFPEKLIPLMIHNIITRKPLPVYGDGLNVRDWLHVRDHAVAVETV
LKQAAPGSVYNIGGNNEWKNIDIVHLVCDLLDARLGRAAGENRSLVAFVKDRPGHDRRYA
IDASRLKRDLGWEPAYTFEQGIAETIDWYLAHQEWVAEVTSGSYRDYYTQQYGSKQ
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgccattcaagcccacatccattctcgtgaccggaggcgccggcttcatcggctccaac
ttcatccattccttcgtcgccgccaaccccggctgcgccgtgaccaatctggattgcctg
acctacgcgggcaacctgaaaaacctgaccgcggtggaggacaacccccgctaccgcttc
atcaagggggacgtctgcgatgccgcgctggtggcagccatcctgaaggaacgggcggtc
gatgccgtcgtccattttgccgccgaatcccacgtggaccgttccatcagcggccccgag
atcttcgtgcgtaccaacgtgctggggacgcaggtcctgctggaggagagccgccggcac
tggcagtccggggcggtgcccgatttccgctatcttcagatatccacggacgaggtctac
ggttccttgggggaaaccggctatttcaccgagcagacccccctggccgccaactctcct
tattcggccagcaaggccggggcggacctcctggtgcgggcctaccacgaaacctacggc
atgccgaccctcaacacccgctgctccaacaactatggcccctaccatttccccgaaaaa
ctgattccgctcatgatccacaacatcatcacccgcaaaccgctgccggtctacggcgac
ggcctcaacgtgcgcgactggctccatgtgcgggaccacgccgtggcggtggaaacggtc
ctgaaacaggccgcgcccggctcggtctataatatcggcggcaacaacgagtggaagaac
atcgatatcgtccatctggtctgcgacttgctggatgcccggctggggcgcgccgccggc
gagaatcgcagcctggtcgcctttgtcaaggaccgtcccggccacgaccgccgctatgcc
atcgacgcatccaggctgaagcgcgatctgggctgggagcctgcctataccttcgaacag
gggatcgccgaaaccatcgactggtacctggcccatcaggagtgggtggccgaggtcact
tccggctcgtaccgcgactattacacgcagcaatacgggagcaaacaatga
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