Geobacter sp. FeAm09: FO488_09235
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Entry
FO488_09235 CDS
T07988
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
gef
Geobacter sp. FeAm09
Brite
KEGG Orthology (KO) [BR:
gef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gef03016
]
FO488_09235 (thpR)
Enzymes [BR:
gef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FO488_09235 (thpR)
Transfer RNA biogenesis [BR:
gef03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FO488_09235 (thpR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QEM68326
UniProt:
A0A5C1MBI4
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All DBs
Position
complement(1953959..1954528)
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AA seq
189 aa
AA seq
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MRLFIAIELPAEIKRQLEKMDMRMSGCRWVPAEQIHLTLAFLGEVDGVTLKRLTGALAAI
RAPGFTLRFSGTGCFPDRRRPRILWAGLEPQPKLDALVSLVREAVLACAIPQEERPFSPH
ITLARLKLPAPREVEAFLMGNRALELPPADVREFVLFESSLTSRGAVHTPVKAFPLAARP
ISDKTPQGT
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgcggctctttatcgccatcgagctgcccgcagagatcaagcggcaactggaaaaaatg
gacatgaggatgtcggggtgccgttgggtgccggcggagcagatccatctgaccctggcg
tttctcggagaggtggacggcgtcacgctcaagcggttgaccggggcattggcggcgatc
cgggcgcccgggttcaccctccgtttcagcggcaccggctgctttcccgaccgccgacgc
cccaggatactctgggccggtctggagccgcagccgaaactggacgctctggtctccctg
gtgcgcgaagcggtgctggcctgcgccatcccccaggaggaacgccctttttccccgcac
atcaccctggcccgtctcaagctccccgccccccgcgaggtggaggcgtttcttatgggc
aaccgcgcactggagttgccgccggctgacgtccgggagtttgtcctctttgagagcagt
ctgacgtcccgaggggccgtccacacgccggtaaaggcattccccctcgcagcacggccg
atatccgacaagaccccacagggcacgtga
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