Geobacter sp. FeAm09: FO488_15020
Help
Entry
FO488_15020 CDS
T07988
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gef
Geobacter sp. FeAm09
Pathway
gef00300
Lysine biosynthesis
gef00470
D-Amino acid metabolism
gef01100
Metabolic pathways
gef01110
Biosynthesis of secondary metabolites
gef01120
Microbial metabolism in diverse environments
gef01230
Biosynthesis of amino acids
Module
gef_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gef00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FO488_15020 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FO488_15020 (lysA)
Enzymes [BR:
gef01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FO488_15020 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
SBSN_GxHH_rpt
Motif
Other DBs
NCBI-ProteinID:
QEM69337
UniProt:
A0A5C1MIB6
LinkDB
All DBs
Position
3189080..3190333
Genome browser
AA seq
417 aa
AA seq
DB search
MNHFQYKASELYAEGVRLADIVAKVGSPVYVYSHATLERHFKAFDDAFAPVPHTVCYSVK
ANSTQSVLKTFINLGGGVDIVSGGELYRALKAGVDPKKVVYSGVGKKDDEIEYALNTGIL
MFNVESEQELTRISEIASRMGKKAGIAIRVNPDVDPGTHPYITTGLKNAKFGITIDRAME
EYKRAAGLPGIEVIGIDMHIGSQLTKVNPFVDSIEKLKVMIGKLKEMGISLQYLDCGGGL
GIQYNNEEPPLPADYGKEIIAATKDLGLHLVFEPGRNIVGNAGILVARCLYTKERDEKNF
IMIDAGMNDLARPALYGSFHSVQAVKKDQDGVITADIVGPICESGDFLVKDREVPMFKQG
DLMAFMSAGAYGFAMSSSYNSRPRVAEVMVKGDVFEVVRERETIEDLVKGEKVATFL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactttcagtacaaagccagcgaactctatgcggaaggtgtgcggcttgcggat
atcgtcgccaaggtcggctcgccggtctacgtctattcccacgccaccctggaacggcac
ttcaaggcctttgacgatgcctttgccccggtgccccataccgtctgctattcggtcaag
gccaactctactcagtcggtgctcaaaaccttcatcaacctggggggcggggtggacatc
gtctccggcggcgaactgtaccgggcgctcaaggccggcgttgacccgaagaaggtggtc
tactccggcgtgggcaaaaaggacgacgagatcgaatacgccctgaataccggcatcctg
atgttcaacgtggagtctgagcaggaactgaccaggatcagcgagatcgcctctcgcatg
gggaagaaggccggcatcgccatccgggtcaatccggacgtggaccccggcacccatccc
tatatcaccaccggcctgaaaaacgccaaattcggcatcaccatcgaccgggccatggag
gagtataaacgcgccgccggcctgccgggcatcgaggtgatcggcatcgacatgcacatc
ggctcccagttgaccaaggtcaaccccttcgtggattccatcgaaaagctgaaggtcatg
atcggcaagctgaaggagatgggcatcagcctgcaatacctggactgcggcggcggcctg
ggcatccagtacaataacgaggaaccgcccctgccggccgactacggcaaggagatcatc
gccgccaccaaggatctgggcctgcacctggtgttcgagccggggcgcaacatcgtcggc
aatgccggcatcctggtggcccgctgtctctacaccaaggagcgggacgaaaagaacttc
atcatgatcgacgccggcatgaacgatctggcccggccggccctgtacggatccttccac
agtgtgcaggcggtgaagaaggaccaggacggcgtgatcaccgccgacatcgttgggccg
atctgcgagtcgggcgacttcctggtcaaggaccgggaggtgcccatgttcaagcaggga
gacctgatggccttcatgtcggccggcgcctacggttttgccatgagcagctcctacaac
agccgcccccgcgtggccgaggtaatggtcaaaggagacgtattcgaggtcgtccgcgag
cgcgagacgatcgaagacctggtcaagggcgagaaggtcgccacattcctgtag
DBGET
integrated database retrieval system