Geobacter sp. FeAm09: FO488_17920
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Entry
FO488_17920 CDS
T07988
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
gef
Geobacter sp. FeAm09
Pathway
gef00300
Lysine biosynthesis
gef00470
D-Amino acid metabolism
gef01100
Metabolic pathways
gef01110
Biosynthesis of secondary metabolites
gef01120
Microbial metabolism in diverse environments
gef01230
Biosynthesis of amino acids
Module
gef_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gef00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FO488_17920
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FO488_17920
Enzymes [BR:
gef01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FO488_17920
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
RGM_C
Motif
Other DBs
NCBI-ProteinID:
QEM69844
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All DBs
Position
complement(3818442..3819278)
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AA seq
278 aa
AA seq
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MKFTKMQGAGNDYVYVNCFEETVADPRQTAIQVANRNFGIGSDGLILIMPSDKADVRMRM
FNSDGSESEMCGNGIRCVAKYAYDHGIVAKTEITAETGAGILTLQLVPGDDGTIAKVRVN
MGPPRLTRGEIPMTGDAAARVIAEPLTVLDRTFSITCASMGNPHCVIFVDDVENFPVSTY
GPLIENHELFPRRTNVEFVQIFSRTEVRQRTWERGAGETLACGTGSSAVTAACVLNGLTE
KKILNHLSGGDLEMEWAEDGTIYMTGPAVEVFSGEIKL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaccaaaatgcagggcgccggcaatgattacgtctatgtgaactgcttcgag
gagacggttgccgacccccggcagacggccatacaggttgccaaccgcaacttcggcatc
ggctcggacgggctcatcctgatcatgccctcggacaaggccgacgtgcgcatgcggatg
ttcaattccgacggctccgagtccgagatgtgcggcaacggcatccgctgcgtggcaaaa
tacgcctacgaccatggcatcgttgcgaaaaccgagatcaccgccgaaaccggggccggc
atcctgaccctgcaactggtgccgggcgacgacggcacgatagccaaggtccgcgtcaac
atgggtccgccgcggctgaccaggggcgagatccccatgaccggcgatgccgccgcccgg
gtgatcgctgagccgctcacggtcctcgaccgcaccttttcgatcacctgcgcctccatg
ggcaacccccactgcgtgatcttcgtggacgatgtggagaacttcccggtttccacctat
gggccgctgatcgagaaccacgaactgttcccgcgccgcaccaatgtggagttcgtccag
attttctcgcgcaccgaggtccgccagcggacctgggagcggggcgccggcgaaaccctg
gcctgcggcaccggctccagcgccgtgaccgcggcatgcgtgttgaacggcctgaccgag
aaaaagatcctcaaccacctttcggggggcgacctggagatggagtgggccgaggacggc
accatctacatgaccggcccggcggtcgaggtgttcagcggcgagatcaaactgtag
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