Granulicatella elegans: LK443_04620
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Entry
LK443_04620 CDS
T09296
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
geg
Granulicatella elegans
Pathway
geg03030
DNA replication
geg03430
Mismatch repair
geg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
geg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LK443_04620 (dnaX)
03430 Mismatch repair
LK443_04620 (dnaX)
03440 Homologous recombination
LK443_04620 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
geg03032
]
LK443_04620 (dnaX)
03400 DNA repair and recombination proteins [BR:
geg03400
]
LK443_04620 (dnaX)
Enzymes [BR:
geg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LK443_04620 (dnaX)
DNA replication proteins [BR:
geg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LK443_04620 (dnaX)
DNA repair and recombination proteins [BR:
geg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LK443_04620 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_5
DNA_pol3_gamma3
AAA_30
AAA_22
TIP49
AAA_assoc_2
AAA_19
AAA_7
AAA_24
AAA_14
AAA_16
Rad17
nSTAND3
PIF1
Mg_chelatase
AAA_18
DUF815
RCF1-5-like_lid
BRF1
Motif
Other DBs
NCBI-ProteinID:
UEA32216
LinkDB
All DBs
Position
920395..922113
Genome browser
AA seq
572 aa
AA seq
DB search
MAYQALYRKWRPQKFEDMVGQTAVTKTLKNAIVHHKTSHAYLFTGPRGTGKTSAAKIFAK
AINCLNPKDGEPCNDCLLCKGITEGTIGDVIEIDAASNNGVEEIRDIRDKARYAPTQATY
KVYIIDEVHMLSTGAFNALLKTLEEPPKNVIFILATTEPHKIPATIISRTQRFDFRRITN
DEIIQRLRYILEQEEIAYEEEALSVIARCANGGMRDALSLLDQVISFSDDKVSFEQAIQV
SGSLTDELMIEFVRLLTQQQAQAALLQLQDLLLLGKEASRLIEEWLEFSRDLLVAKQTGD
MIGRSEDFVEFAKEVEEAFLYRFMDALNQTQQEMRFTTKPTISLEVFTIKMAQPVVAVVQ
QAAPANQEYVSQLEQRLQSLQQQMSQLLQGQGIVAPKKASTPQAKASTYKPNIGEVYKVL
DAATRKDLIFIRELWGDLLQMLSITQRALLKASEPVAASPNGFVLKFDYEILCQRAQESV
ELHEDIARHCQTLAQYPGNFVSATGEQWVQIRQDYLRDKKEKQEAEGVTHATEMEEQPTD
EEEKNEVEQLVQNTIDLFGEEIVHISEETENN
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaagcgttataccgaaaatggagaccacaaaaatttgaagatatggtgggg
caaactgcagttacgaaaacattgaaaaatgcgattgtccatcataaaacaagccatgca
tatttatttacaggaccaagaggaactgggaagactagtgctgcgaaaatttttgctaaa
gcaattaactgtttaaatcctaaagatggagaaccttgtaatgactgtttattatgtaaa
ggtattacagaaggaacgattggggacgttattgaaatcgatgcggcgagtaataatggg
gtagaagaaattcgtgatattcgagataaagctcgatatgctccaactcaagcaacgtat
aaagtttatattatcgatgaagtacatatgttatcaacgggagcgttcaatgctttatta
aaaacattggaagaaccgcccaaaaatgttattttcattttagcaacgactgaaccgcat
aaaattccggcaacaattatttcaagaacacagcgatttgattttagaagaattacgaat
gatgaaattattcaacgacttcgttatattttagaacaagaagagattgcttatgaagaa
gaggcgctaagtgtcattgctcgttgtgctaatggtggaatgcgtgatgcgttgagttta
ttagatcaagtcatttcatttagtgatgataaagtgagttttgaacaagccattcaagtt
tctggaagtttaacagatgaattaatgattgaatttgttcgcctattgactcagcaacaa
gcgcaagcagctttattacaattgcaagacttattattgctaggaaaagaagcatctcgt
ttaattgaagaatggttagaattttctagagatttattagtagctaaacaaaccggagat
atgattggtagaagtgaagattttgtggagtttgcaaaagaggtcgaagaagccttttta
tatcgctttatggatgctttaaatcaaacgcaacaagaaatgcgatttacaacaaaacca
accattagtttagaagtctttacgattaaaatggctcaaccagtagtagcagtagttcag
caagcagccccagcaaatcaggaatatgtctcacaattggaacaacggttgcaaagttta
cagcaacagatgtctcaattattacaaggacaaggaatagtagctcctaaaaaagcatca
accccacaagcaaaagcaagtacgtataagccaaatattggtgaagtttacaaagtacta
gatgctgcaactcgtaaagatttaatttttattcgagaattgtggggagatttattacaa
atgctttcgatcactcaaagagcactattgaaagcaagcgaacctgtagcggccagtcca
aatggctttgtcttaaaatttgattatgaaattttgtgtcaaagagcacaggaaagtgta
gaacttcatgaagatattgctcgtcattgtcaaacgttagcgcaatacccaggaaatttt
gtcagcgcaacaggagaacaatgggtacaaatacgacaagattatttaagagataagaaa
gaaaagcaagaagcagaaggtgtgactcatgcaacagaaatggaagagcaaccgactgat
gaagaagaaaaaaatgaagtggaacaattagttcaaaatacaattgatttgtttggagaa
gaaattgttcatatatcagaagaaacagaaaacaattaa
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