Granulicatella elegans: LK443_05690
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Entry
LK443_05690 CDS
T09296
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
geg
Granulicatella elegans
Pathway
geg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
geg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LK443_05690 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
geg03019
]
LK443_05690 (pnp)
03016 Transfer RNA biogenesis [BR:
geg03016
]
LK443_05690 (pnp)
Enzymes [BR:
geg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LK443_05690 (pnp)
Messenger RNA biogenesis [BR:
geg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LK443_05690 (pnp)
Transfer RNA biogenesis [BR:
geg03016
]
Prokaryotic type
tRNA degradation factors
LK443_05690 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_RRP5
SPATA25
S1_2
KH_2
Ribosomal_L6e
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UEA30794
LinkDB
All DBs
Position
1150483..1152588
Genome browser
AA seq
701 aa
AA seq
DB search
MSEKKVYSYEWGGRLLQVEIGQLAKQANGAVLVRYGDTVVLTAAVGTKQAKDTDFFPLTV
NYEEKMYAAGKIPGGFIKREGRPSEHATLTARLIDRPIRPMFAEGFRNEVQITNTVMSVD
PNCPPEMAAMFGSSLALCISDIPFDGPIAGVDVGRVNGEYVINPTTEQVELSDIELSVAG
TATAINMVESSAKEVSEEDMLGALLFGHEEIKKLVAFQQQIVQEIGKEKMEVTLLSFDPE
IEKQVKDLFSQAMINAIQTEEKLAREENTEKVKETALEHFEAVLEENDEKAGLLKQVSQL
VDNLEKDEVRRLITEEKVRPDGRKIDEIRPLSSEIDLLPRVHGSGLFTRGQTQALTSATL
APLGEYQVIDGLGIEEGKRFIHHYNFPQFSVGSVGRAGSPGRREIGHGALGERALKQVIP
TPEDFPYTIRLVSEVLESNGSSSQASICAGTLALMAAGVPIKAPVAGIAMGLISDGTNYT
VLTDIQGLEDHLGDMDFKVAGTTTGITALQMDIKIQGITEQILREALTQAKKARFEILEE
LTSTIAEPRKELSPYAPKIEMISIHPDKIKVVIGRGGETINNIIDETGVKIDIDQEGHVS
IASTDAAMIQRAKEIIEDLTREIEAGQVYEGTVRRIEKFGAFVEIAKGKDGLVHISELAH
ERVAKVEDVLAIGDKVKVKVTEIDGQGRINLSRKALIEKEA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaaaaaagtatatagctatgaatggggcggtagactgttacaagttgaaatc
ggtcaattagcgaaacaagcaaatggtgctgtcttagttcgttatggagacacagtggta
ttaacagcagccgttggtacaaaacaagcaaaggatacagatttttttccattaacagtg
aactatgaagaaaaaatgtatgcagcaggtaaaattcctggaggatttattaaacgtgaa
ggacgtccaagtgaacatgcgacattaacagctcgtttaattgaccgtccaattcgtcca
atgtttgcggaaggttttcgtaatgaagttcaaattacaaatacagtaatgtctgtagat
ccaaactgcccaccagaaatggcagcaatgtttggttcgagtttagcattatgtatttca
gatattccatttgatggtccaattgctggggtagatgttggtcgtgtaaacggagaatac
gtgattaaccctacaactgaacaagttgaattatcagatattgaattatctgtagcgggt
actgcaactgcgattaacatggtagaaagctctgctaaagaagtgagcgaagaagatatg
ttgggagcattattattcggtcacgaagaaattaaaaaattagtagctttccaacaacaa
atcgtccaagaaattggaaaagaaaaaatggaagtaacattgctatcatttgacccagaa
atcgaaaaacaagtgaaagatttattcagtcaagcaatgattaatgcaatccaaacagaa
gaaaaattagctcgtgaagaaaatactgaaaaagttaaagaaactgccttagaacatttt
gaagctgttttagaagaaaatgatgaaaaagcaggtttattaaaacaagtttctcaatta
gttgataatcttgaaaaagacgaagtacgtcgtttaattacagaagaaaaagtacgtcct
gatggtcgtaaaattgacgaaattcgtccattgtcttcagaaattgatttattaccacgt
gttcatggttcaggtttatttactcgtggacaaactcaagcattaacttccgcaacttta
gcacctttaggtgaatatcaagtcattgatggtttaggaattgaagaaggtaaacgattc
attcaccactataatttcccacaattctctgtaggttcagtgggtcgtgctggtagccca
ggtcgtcgtgaaattggtcacggtgctttaggggaacgtgcattgaaacaagtcattcca
actccagaagatttcccctatacaattcgtcttgtatcagaagtgttagaatcaaatggt
tcttcttctcaagcaagtatttgtgcgggaacattagccttaatggcagcaggtgttcca
attaaagcgccagttgcgggtattgcgatgggattaatttctgatggtacaaattataca
gtattaacagatatccaaggtttagaagaccacttaggagatatggactttaaagttgct
ggtacaacaactggtattacagctttacaaatggacattaaaatccaaggaattacagaa
caaattttacgtgaagcattaacacaagcgaaaaaagctcgttttgaaattttagaagaa
ttaacttctacaattgctgaacctcgtaaagagttaagcccatatgcacctaagattgaa
atgatttctattcacccagataagattaaagtcgttatcggtcgtggtggagaaacaatc
aataacattattgatgaaacaggcgttaaaattgatatcgatcaagaaggtcatgtatca
attgcttcaacagatgcagcaatgattcaacgtgcaaaagaaattattgaagatttaaca
cgtgaaatcgaagctgggcaagtgtatgaaggaactgttcgccgtattgaaaaattcgga
gcttttgttgaaattgcaaaaggaaaagatggattagttcacatctcagaattagcgcat
gaacgtgtagcgaaagtggaagatgtattagccattggagataaagtaaaagtaaaagtt
actgaaattgacggacaaggtcgtatcaacttatctcgtaaagcattaatcgaaaaagaa
gcttaa
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