Granulicatella elegans: LK443_05960
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Entry
LK443_05960 CDS
T09296
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
geg
Granulicatella elegans
Brite
KEGG Orthology (KO) [BR:
geg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
geg03019
]
LK443_05960
Messenger RNA biogenesis [BR:
geg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LK443_05960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Clavanin
DUF739
Motif
Other DBs
NCBI-ProteinID:
UEA30826
LinkDB
All DBs
Position
1196508..1197464
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AA seq
318 aa
AA seq
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MVKKLYDYAVDEPLELFLLIKTADVRLAKNGKPFLAFTFQDKSGQMDGKYWSATPEEIER
FSSGSIVYLAGKREIFNGMPQIKITGLRLSRPEFGEPNEVSDFLEHAPMKRDEMETELNS
ILFEIINPVMRRIVHKILGKYQQDFFEYPAAKRHHHAFAGGLSYHTLSILRLAKSIAEQY
PEVNRSLLLSGALLHDIGKIIELSGAVGTEYTLKGKLMGHIVLMDEEITKACEELEIDQS
HEDVVLLKHLVLAHHGKLEYGSPVRPLLLEAEILHHVDLMDASVTMITSALQKTEPGQFS
ERIFGLDHRTFYKPQTVE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaaaattatatgattacgcagtagatgaaccgttggagttatttttattaatt
aaaacagcagacgtaagattagcaaagaatggaaagccatttttagcttttaccttccaa
gataagtcaggtcaaatggatggaaaatattggtctgcaactccagaagaaattgaacgt
ttttcatcaggaagtattgtttatcttgctggaaaaagagaaatctttaatggaatgccc
cagattaaaattactggattacgtttatctagaccagaatttggtgaaccaaatgaggtt
tcagatttcttagaacacgcaccaatgaaaagagacgaaatggagactgaattaaattct
attctgtttgaaatcattaatccagtcatgcgaagaattgtgcacaaaattttagggaag
tatcaacaagatttcttcgaataccctgcagctaagcgacaccatcatgcgtttgcagga
ggattaagttatcatactttatcgatattacgcttagctaaatctattgcggaacaatat
ccagaagtaaatcgttcattattactttcaggtgctttattacatgatattgggaagatt
attgaattatcaggagctgttggaacagagtatactctaaaaggaaaattaatgggtcat
attgtgttaatggatgaagaaataacaaaagcctgtgaagaattagagattgatcaaagc
catgaagatgttgttttattaaaacatttagtattagctcatcatggtaaattagaatat
ggttctccagttcgtccattattattagaagcagaaattttacatcatgtggacttaatg
gatgcgagtgtcacaatgattacttcagcattacaaaagacagaaccaggacaatttagt
gagcgaatttttggattagatcatcgaacattttataaaccacaaactgtagagtag
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