Granulicatella elegans: LK443_07620
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Entry
LK443_07620 CDS
T09296
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
geg
Granulicatella elegans
Brite
KEGG Orthology (KO) [BR:
geg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
geg03400
]
LK443_07620
Enzymes [BR:
geg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LK443_07620
DNA repair and recombination proteins [BR:
geg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LK443_07620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UEA31131
LinkDB
All DBs
Position
1533932..1537501
Genome browser
AA seq
1189 aa
AA seq
DB search
MSFEVILTKETSAKVAHIASKIADWLKQSSINQVIYLVPDHIKFSAELEMIQQVGQLLQQ
PKNSYAVTKLQVYSFKRLAWYFLRDHAALQRPSLSKVGICMMLQKILTEYQDELVLFNKE
SRHKGFIERLSAVIQEFRLGGIEVEDFSEWFEQDSYEEIDQRLKEFGIIYKHYLAYLKQD
FVQSEDLLKLLGEEISSMDLSNTYVVIDQSYHLNSMELEVVDALVKSCGGVEFFTTATTD
AFKPKEPLESGLFDSNRQLISRLLNWLMIDESKPVLKELTEENTTYHPDFFELEQYWLET
SGGLETSSNCSTSTIEALQWTTYEDERQEIQETLATIKKLVDSGQYRYQDIQILSRNLEE
QQTLLQPLLETYQIPYFMDLSDTMEHHPLIQVLDAIFAIQKHFWRYHDIMNLLRSEYCFW
PLNRANSNGKNNEEESLREALIHYRQKLDETETIILAQGYEGKDWVSSKIWNYQLETIDE
DSLSSKEVFVHQQLTQAQELREQVVSLLEPFYKKLDKVETTKEAISLLYQLLERIGVTDA
FLYWRNHAANIGDIQTARRQDQVWNEFLKLLEEYVYIFGNEPFDWEIFQLLLHTGFEHTH
YNMAPSTLDQLTCTGIDSVRYSPKKVTFVIGLSQGVLPRMEEESGLMTDEERVYLLSKLD
SGRFLHPTTIQKQSVEPFLFYKVLTSATEKLYLSMHHTDKGAKLKPSSFVERILNKYEIT
TVDGNQKQHERFEQGDFVTIHELFTTLLQKLRQYKFSKEEEIPSIWRALPHLLRQDKDFQ
QEYHTLVDSVFHLNIAKQLPKELATELYGNKLHLSTSQVETFYKDPFSHFLQYGLNLRER
REFELTAAGSGEYFHETFDQFIRKIHELKLDIRSMDAATTEKVLQEIFASMNEDARFQIL
NATPRMKWTKVLLQDTIRQTLSAALLQLQQIQVTPWKTEVAFGREPYKKIEIPLNDTQSL
FIRGKIDRIDLLETEKGYHLGIVDYKSSAQKFDINRLRYGIQLQLLTYLSVARKIVSDQF
KKTVTPYGGLYMHVFQPSFSAKDLKKDTDFEETRLKKYKLSGLLTNDLGVLQQVQPDFEA
GDSIVLPFGVKKDGEYKATSQVYAPDDINLLMDFAFYQLKTAGERILNGENQIAPFDELK
EYADSVNGKFSAISMFDATNPENNYQFLTKMPLQENLTWMRNKIDGKEE
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgaagtcattcttacaaaagaaacaagtgcaaaagttgcgcatattgctagc
aaaattgccgattggttaaaacaatctagtataaatcaagttatttatcttgtaccagat
cacattaagttttctgcagaattagaaatgattcaacaagtggggcaattattacaacaa
ccgaagaattcttatgctgtgacaaaattacaagtatacagttttaaacgattagcatgg
tattttttaagagaccatgctgcattacaacgtccttctttatccaaggtcggaatttgt
atgatgttacaaaaaatactaactgaatatcaagatgaattagtattatttaacaaagaa
tctcgtcataaaggatttattgaacgtttatctgctgtcattcaagaatttcgtttagga
ggaatcgaagtagaggacttctcagagtggtttgagcaagattcctatgaagaaattgac
caacgtttgaaagagttcggcatcatttataaacattatttagcttatttaaagcaagat
tttgtacaatcagaagatttattaaaactattaggggaagaaatttcatcgatggattta
tctaatacctatgtggtgattgatcaatcgtatcacttaaattcgatggaattagaagta
gttgatgctttagtcaaatcgtgtggaggagtagagttttttacgactgcaacgacagat
gcttttaaaccaaaagaaccgttagaatctggattatttgattccaatcgtcaattaatt
tctcgcttactaaattggttaatgattgacgaaagtaaacctgttttaaaagaattaaca
gaagaaaatactacttatcatcctgatttttttgaactcgaacaatattggttagaaaca
agtggtggacttgaaacttcttctaattgttcaacaagtacaattgaagctttacaatgg
acgacttatgaagatgaacgtcaagaaatccaagaaacattagcaacgattaaaaaatta
gtcgatagcggtcaatatcgttaccaagatattcaaattttatcgagaaatttagaagaa
caacaaacactcttgcaacctttattagaaacatatcaaattccttatttcatggattta
tcagatacaatggaacatcatccactgattcaagtgctagacgcgatttttgctattcag
aagcatttttggcgttatcatgacattatgaacctactaagaagtgaatattgtttctgg
cctttaaatcgagcaaattcaaacggtaaaaataatgaggaagaaagtttaagagaagcg
ctcattcactaccgtcaaaaattagacgaaacagagaccattatactagcgcaaggatac
gaaggaaaagattgggtttcaagtaaaatatggaattatcaacttgaaacgattgatgaa
gatagcttaagtagcaaagaagtattcgttcatcaacaattaacacaagcacaagaacta
cgagagcaagttgtctctttattagaaccattttacaaaaaattggataaagtcgagacg
acaaaggaagcgataagtcttctttatcaattattagaaagaattggtgtaacggatgca
ttcctatactggagaaaccatgctgctaatattggggatatccaaacagctcgtagacaa
gatcaagtatggaatgaatttctaaaattattagaagaatatgtttatatttttggaaat
gaaccattcgattgggaaatattccaattattactacatactggatttgaacatactcat
tacaatatggctccttctactttagatcaattaacgtgtacaggaatcgattctgttcgt
tattctcctaaaaaggttacttttgtcattggtttatctcaaggtgtccttcctagaatg
gaagaggagagtggtctaatgactgatgaagaaagagtgtatttattaagtaaattagat
agtggacgtttcttacatccaacaaccattcaaaaacaatcagttgagccatttttattt
tataaagtgttaacttcagcaactgaaaagttatacttatcgatgcatcatacggataaa
ggtgctaaattaaaaccatccagttttgtagaacgtattttaaataaatatgagattact
acagtggatggcaatcaaaaacaacatgaacgatttgaacagggcgactttgtaacgatt
catgaattatttacaactttattacaaaaacttcgtcagtataaattttcaaaagaagaa
gagattccatctatttggagggctttacctcatttattaagacaggataaagattttcaa
caggagtatcatacattagtagacagtgtattccatttaaatattgcaaaacaattacca
aaagaattagctactgaactatatggaaataaattgcatttatcgacttctcaagtggaa
actttttataaagatccatttagtcatttcttgcaatatggattaaatttacgagagcgt
agagagttcgaattaacagcagctggatctggtgaatatttccatgaaacatttgaccag
tttattcgtaaaattcatgaattgaaattagatattcgatctatggatgctgccacaaca
gagaaagtattacaagaaatttttgcctccatgaatgaagatgcaagattccaaatatta
aatgccacaccgagaatgaaatggacaaaagtacttttacaagatacgattcgacaaaca
ttatcagcagcactcttacagttacaacaaatacaagtaacaccatggaaaacagaagta
gcatttggaagagaaccctataaaaaaattgaaatcccattaaatgacactcaatcctta
tttattcgtgggaaaattgaccgtattgaccttttagaaactgaaaagggttatcactta
ggaattgtggattataaatcttcagcgcaaaaatttgatatcaatcgattacgttatggg
attcaattacagctactaacctatttgtcagttgctagaaagattgtttctgaccaattt
aagaaaactgtgacgccttatggtggattatatatgcatgttttccaaccaagctttagt
gctaaagatctaaaaaaagatacagattttgaagaaactcgtctgaagaaatataaatta
tctggattattgacgaatgatttgggagttctccaacaagttcaacctgattttgaagca
ggagactctattgtattaccatttggagtaaaaaaagatggagagtataaggcaactagc
caagtatacgctcctgatgacatcaatttattaatggactttgctttctatcaattgaaa
actgcaggagaaagaattttaaatggagaaaatcaaattgccccatttgatgaactaaaa
gaatatgcagattcagtaaatggaaaattcagtgcaatttcaatgtttgatgcaacgaat
ccagaaaataattatcaatttttaacgaaaatgcctcttcaagagaacttaacttggatg
agaaataaaattgacggaaaggaggagtag
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