Granulicatella elegans: LK443_07625
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Entry
LK443_07625 CDS
T09296
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
geg
Granulicatella elegans
Brite
KEGG Orthology (KO) [BR:
geg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
geg03400
]
LK443_07625 (addA)
Enzymes [BR:
geg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LK443_07625 (addA)
DNA repair and recombination proteins [BR:
geg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LK443_07625 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PDDEXK_1
AAA_12
DEAD
AAA_30
LtuB
AAA_14
DUF4358
Motif
Other DBs
NCBI-ProteinID:
UEA31132
LinkDB
All DBs
Position
1537505..1541236
Genome browser
AA seq
1243 aa
AA seq
DB search
MIPVKPEGIQATPEQWQAIWQRGDNLLVSASAGSGKTKVLVDRIMGYIEDGVNIDSLLIV
TFTEAAAKEMKERLRTNLEKAITKETDLAKKHMYIKQLSLLPNATISTIHSFCMKVIRRY
FYLSQLDPVFSLLNEVEGTLLKEKVWRKIQDELLEEHSWMDGLMRYFSSDRNDDGFTTLV
YQLYDFSRSKPNPKQWISSLPDLYETKDEYGEIPIIKDQFAPYIVEELKYLVSAYDELLK
LAEVTEFKKCRDVVEADAQKIQEVYTAFESGNYTAAYTLSQQVSFDRFPTVPKKDETTDR
EAVQAIKRKRDSLKKHWEDQLLATAFFESPEIQMKHLKEIYPMMLHLSQVVFKFYEAFQL
EKKTSNKIDFSDLEHDTLAILSTEKNGVLIAKKYYQELYTEVLIDEYQDVNRVQEAILTS
VARENNLFMVGDVKQSIYAFRLADPSLFRDKYEAYADENGGKRIILAENFRSRDQVLSFT
NLIFRQIMDHELGQIDYDDDAALKTGNKLYSDDTDKFSECYIIQNTNLDEDEEEISELET
ESLIDSSASAEVHFIAGKIKELMANQFEIMHEESTKENPKKRPIQYKDIVILAPTKANNG
LIEEIFTHYQIPVLVQKNLQYFKRTEIAIMMSVLKIIDNPIQDIPFVAVLRSGIIGLDEI
ALAHIRKNNQSCSFYEACVKFVENFKLEEVTYYDSAQQNQLKERITLFLNQLEAWRDIAN
HQSISTLIWQIYMDTNYLTYVHGQSVGQQRVLNLHALYKYAKDFEDSSFKGLRNFVRFIQ
QMQHKKQDLEEPTQISDEEDAVRVMTIHASKGLEYPVVFLMNAGKKFNQQDIRQQAIRSD
ELGVGVKYLQLPERIQWTTIPYVMAYKAEKNKLLSEEMRKLYVAMTRAREKLIIVGSLKD
FEKFKEEHSMIEEIDEETLPFSLRYHVDNYLTWILMATMRKQEKVQFHQEVIELEQIKKN
ALNWIQETEIFSINEEEWLQKQVEAKPVKNLQNLLQELKQPYPYLLASTTASYQSVSEIK
RMNEEPDVKQLPHLEEQPQEAEKTVQQYIYLTSELAKPSFMESKQKVSAAERGSGLHLLM
QKLDLTRNITPEFIQETIQQLVETQFLEKEVAAVIPVDQVYHFFQSDFGQWIQEHQALLN
REQAFSHVVTAKRIFKHLPDNEDSMLIHGIIDGFVELDDEIILFDYKTDHVVPTQKGIQK
VVDKYKQQLNLYAEALETSYQKKVTKRMLCLLSIGQSIDISNG
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
gtgataccagtaaaaccagagggtatacaagcaactcctgaacagtggcaagcgatttgg
caaagaggggataatttattagtttctgcttctgctggatcaggaaaaacaaaagtatta
gtcgaccgaattatgggatatatcgaagatggtgttaatatcgattctttattaattgtg
acttttactgaagctgctgctaaagaaatgaaagaacgtttacgtaccaatttagaaaaa
gctattacaaaagaaactgatcttgctaagaagcatatgtatatcaaacaattaagttta
ttaccaaatgcaacgatttcgacaatccatagtttctgtatgaaagtcattcgtcgttat
ttctatttaagtcaattagatcctgtattttcactattaaatgaagtagaggggacttta
ttaaaagaaaaagtttggagaaaaattcaagatgaattattagaagaacattcttggatg
gatggactaatgcgctatttttctagcgaccgtaatgatgatggatttaccacattagtg
tatcaactatatgatttttcacgttcaaaaccaaatccaaaacaatggatttcttcctta
ccagatttatatgaaacaaaggatgaatacggcgaaatccctattataaaggatcaattt
gcaccttatattgttgaagaattaaagtatttagtttctgcttatgatgaattactgaaa
ctagctgaagtaaccgaatttaagaaatgtagagatgtagttgaagctgatgcccaaaaa
attcaggaagtgtatacagcatttgaaagtggtaattacacagcagcgtatacattatcg
cagcaagtgagttttgaccgtttcccaaccgttcctaaaaaagatgaaacaaccgataga
gaagccgttcaggccattaaacggaaaagagatagcttaaagaaacattgggaagatcaa
ttattagcaacagcatttttcgagtctccggagattcaaatgaagcatttaaaagaaatt
tatccaatgatgttgcatttatctcaagttgtctttaaattttatgaagctttccaatta
gaaaagaaaacttcaaataaaattgatttttctgacttagaacatgatacattagcgatt
ctttctactgaaaaaaatggagttctcattgctaaaaaatattatcaagaattatatacc
gaagttttaattgatgaataccaagacgtaaaccgtgttcaagaagcaattttaacaagt
gttgctagggagaataatctcttcatggtaggagatgtgaaacaatcaatttatgccttc
cgtttggctgacccatcattatttagagataaatatgaagcctatgcagatgaaaatggt
ggaaaacgaataattttagctgaaaatttccgttctagagatcaagtattatcctttaca
aacttaatttttagacagattatggatcatgaattaggtcaaattgattatgatgatgac
gcagcactaaaaacgggaaataaactttattcagatgatacggataaatttagcgaatgc
tatattattcaaaatacgaatttagatgaggatgaagaagaaatttctgaactggaaacg
gaaagtctgattgatagttcagctagtgctgaagtccattttattgcgggaaaaattaaa
gaattgatggcaaatcaatttgaaatcatgcatgaagaaagtacaaaagaaaatccgaaa
aaacgaccaatacaatataaagatatcgttattttagcaccaacaaaggctaataatgga
ttgattgaagaaatttttactcactatcaaattcctgttttagttcaaaaaaatcttcag
tattttaaacgaactgaaattgctattatgatgtccgtattaaaaattattgataatcct
attcaagatattccatttgtagcggtattacgttcaggaatcattggattagatgaaata
gcattagctcatattcgtaaaaacaatcaatcttgttcgttttacgaagcatgtgtgaaa
tttgtagagaattttaaactagaagaagtgacttattatgatagtgctcaacaaaatcaa
ctaaaagaacgtataacattattcttaaatcagttagaagcttggagagatatcgctaac
catcaatcaatcagtacgcttatttggcaaatttatatggatacgaactatttaacctat
gtacatggacaatctgttggacagcaacgtgtcttgaatttacatgccttgtataagtat
gcgaaagatttcgaagattctagctttaaagggttacgtaattttgttcgatttattcag
caaatgcaacataaaaagcaagatttagaagaacctacacaaatttctgatgaagaagat
gcagtacgtgtcatgacgattcatgctagtaagggattagaatatcctgtggtattttta
atgaatgctggaaagaaatttaatcagcaagatattcgccaacaagcgattcggagtgat
gaattaggtgtcggagtgaagtatttacaacttcctgaaagaattcaatggacaacgatt
ccctatgtaatggcttataaggcagagaaaaataaattattatctgaagaaatgagaaaa
ttatacgtagcaatgactcgtgcacgagaaaaactcattattgtcggttctttaaaagat
tttgaaaaattcaaagaagaacattctatgatagaagagatagatgaagaaacattacca
ttttctcttcgttatcatgtcgataattatttaacgtggattttaatggctacaatgaga
aagcaggaaaaagttcaatttcatcaagaggtgattgaattagaacaaattaaaaagaat
gcactcaactggattcaagagacagaaatattttctataaatgaagaagagtggttacaa
aaacaagtagaagcaaaaccagttaaaaatcttcaaaacttattacaagaattaaaacaa
ccatatccatatttattagcatccacaacagcaagttatcaaagtgtatctgaaataaaa
cgaatgaatgaagaacctgatgtgaaacaattgccacatttagaagaacaacctcaagaa
gcagaaaaaactgtgcaacaatatatatatttaacttctgaattagcaaaaccaagcttt
atggaatctaaacaaaaggtatcagctgcagaacgtggaagcggtttacatttattgatg
caaaaattagacttaactaggaatataactcctgaatttattcaagaaacgattcaacaa
ttagttgaaacacagtttttagaaaaagaagttgctgcagtcattccagtagaccaagtt
tatcatttcttccaaagtgattttggacaatggatacaggaacatcaagcattattaaac
cgtgagcaagcattttcacatgttgtaacagcaaaacgaatctttaagcatttaccagat
aatgaagattcgatgttaatacacggaattattgacggatttgtggaattagatgatgag
attatcttatttgattataagacggatcatgtagtgccgacacaaaaaggtatacagaaa
gtcgtcgataagtataaacaacaattgaatttatatgctgaggcattagaaacaagttat
caaaagaaagttactaaacgtatgttgtgtttattatcaattggtcaatcgattgatatt
tctaatggttaa
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integrated database retrieval system
