Paragemmobacter aquarius: HYN69_00085
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Entry
HYN69_00085 CDS
T05407
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
geh
Paragemmobacter aquarius
Pathway
geh00300
Lysine biosynthesis
geh00470
D-Amino acid metabolism
geh01100
Metabolic pathways
geh01110
Biosynthesis of secondary metabolites
geh01120
Microbial metabolism in diverse environments
geh01230
Biosynthesis of amino acids
Module
geh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
geh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HYN69_00085
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HYN69_00085
Enzymes [BR:
geh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HYN69_00085
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AWB47123
UniProt:
A0A2S0UH40
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Position
14479..15318
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AA seq
279 aa
AA seq
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MTQKMRPSGQAFMKMHGLGNDFVVIDSRGRGSVTTPALARALGDRNRGVGFDQLAEILDA
TGADFTLDFWNSDGSRAGACGNATRCVSDYVMRGLGKDAVTLVTARGELQALRRADGLVS
VNMGQPQTGWAEVPLASAVDTLHLPMAGDPVAVGMGNPHCIFFVPDAEAVDLSGVGPALE
HDPLFPQRTNVEFASVIAPDRLRLRVWERGAGITLACGSGSCATAVAAHLRGLTGRRVLI
DADGGTLEIDWREDGVWMTGPVAHVFDGVLTAEFLAAHP
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaagatgcgcccttccggccaggctttcatgaaaatgcatgggcttggcaat
gacttcgtagtgatcgactcgcgcgggcgcggttcggtcacgactcctgctttggcgcgg
gcgctgggtgatcggaaccgtggcgtggggtttgaccagctggccgagattctcgatgcg
acgggggcggatttcacgctcgacttctggaacagcgatggcagcagggcgggggcttgc
gggaacgccacgcgctgcgtgtcggattacgtgatgcggggtttgggcaaggatgcggtg
acgctcgttacggcgcggggtgaattgcaggccttgcggcgggccgacgggctggtttcg
gtcaatatgggccagccgcagaccggctgggccgaggtgcctttggcatcggcggtcgac
acgctgcacctgccgatggcgggcgatccggtggcggtcgggatgggcaatccgcattgc
attttcttcgtgcccgatgcggaagccgtcgatctgtcaggggttggccctgcgcttgaa
catgacccgcttttcccgcagcgcacgaatgtggaattcgccagcgtcatcgcccccgac
cgcctgcgcctgcgggtgtgggagcggggggcgggcatcacgctggcctgcgggtcgggg
tcttgtgcaacggccgtggcggcccacctgcgcggcctgacggggcggcgggtgctgatc
gacgccgacggcgggacgctggagatcgactggcgcgaggatggggtctggatgaccggc
cccgtggcgcatgtgttcgacggggttctgaccgccgaatttctggcggcccacccatga
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