Paragemmobacter aquarius: HYN69_00195
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Entry
HYN69_00195 CDS
T05407
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
geh
Paragemmobacter aquarius
Pathway
geh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
geh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYN69_00195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
geh03019
]
HYN69_00195
03009 Ribosome biogenesis [BR:
geh03009
]
HYN69_00195
Enzymes [BR:
geh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HYN69_00195
Messenger RNA biogenesis [BR:
geh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HYN69_00195
Ribosome biogenesis [BR:
geh03009
]
Prokaryotic type
rRNA helicases
HYN69_00195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AWB50138
UniProt:
A0A2S0UQP3
LinkDB
All DBs
Position
34126..36561
Genome browser
AA seq
811 aa
AA seq
DB search
MAAPLAAALAAKGYDAMTAVQLAVIAPEVAGRDLLVSAQTGSGKTVAFGLAMAGEVLGGV
DKLLYADKPLALVVAPTRELAQQVQREFEWLYGSTGAQIASCVGGMDYRTEKRALDRGAH
IVVGTPGRLRDHIERRSLDLSGVKAVVLDEADEMLDLGFAEDLEFILGSASEDRRTMMFS
ATVPKEIEKLAATFQRDALRIVAQGESRQHTDIEYRAMSVQARDREHAIFNVLRFYEAQT
AIVFCKTRVNVNHLLARMANRGFQAVALSGELSQTERMHALQALRDGRARICIATDVAAR
GIDLPGLELVVHADLPSNSETLLHRSGRTGRAGKKGTSVLIVPPAEFKKAQRLLQGAKLA
AEWGKAPSAEEVQAKDDVRLLEHPALAADAADEQVMVSQLLERFGPEQVAAGFVRLWREG
RSAPEVLSDAVTPVASAPRERGEFGPSVWFSLSVGHTGRAEARWLLPKVCEQGGITKDGI
GAIRVQQEETFIQIADQVAGRFPQSVEIEPGLVLTRLAGEPSMERAERPAYGAGKPERRA
PAPRAPREDRPAREERAPRDDRPAYVPKPARVVEEGSGWSPADNAPSAEAPAEKKPYAPR
AAYGEKKPYEKKAYAPRDGAAPRPAYGEKKPYAPREGGERSSAPRPAYGEKKPYAPRDGG
DKPSYAPRAAYGDKKPYAPRAAGAEGDDKKPRWKAETGKSAGFKSHGGPEGAGRAAGSKS
HGDKPSYAPRGDGPAKPRGEWAGKSDAKPAYRGKSEGSADARPFKGKSDFGAKPAFGKPA
GAKPFGARPKPAAPRADAKDTSKRFVPPKKK
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atcgccgcgcctttggcagcggctcttgcggccaagggctatgacgccatgacggctgtg
caactcgcggttattgcgcccgaagttgcgggacgcgaccttctggtttcggcacagacc
ggcagcggcaagaccgttgcattcggccttgccatggcgggcgaagtgctgggcggcgtg
gacaaactgctttacgccgacaagccgcttgcgttggtcgtggcgcccacgcgcgaattg
gcccagcaggtgcagcgcgaattcgaatggctttacggctccacgggcgcgcagatcgcg
tcttgtgtcgggggcatggattaccgcaccgaaaagcgggcgctggaccgtggcgcgcat
atcgtcgtcggcacgccgggccgtctgcgcgaccatatcgagcgccggtcgctcgacctg
tcgggcgtcaaggcggtggtgctggacgaagcggacgagatgctcgatctcggcttcgcg
gaagatctcgaattcatcctcgggtcggcgtcggaagaccggcgcacgatgatgttttcg
gccaccgtgccgaaagagatcgaaaagctggcggcaaccttccagcgcgatgcgctgcgg
atcgtggcgcagggcgaatcgcgccagcacaccgatatcgaataccgcgccatgtcggtg
caggcgcgtgaccgcgaacacgcgatcttcaacgtgctgcgtttctacgaggcgcagacc
gcgatcgtgttctgcaagacgcgggtgaacgtgaaccatctgctggcccgcatggcgaac
cgtggctttcaggccgtggcactgtcgggcgagctgagccagaccgagcggatgcatgcg
ctgcaggcgctgcgtgacgggcgggcgcggatctgtatcgccaccgacgttgcggcgcgg
ggcatcgatttgccggggttggaactggtggtccatgcggatctgcccagcaattccgaa
acgctgctgcaccggtcggggcgcacgggacgggcgggcaagaagggtacttcggtgctg
atcgtgccgccggcggaattcaaaaaggcgcagcggttgctgcaaggtgccaagctggct
gccgaatggggcaaagccccgtctgcggaagaagtgcaggccaaggatgacgtgcgcctg
ctggagcatcccgctttggctgccgatgcggcggacgagcaggtgatggtgtcgcaactg
ctggaacgtttcggtcccgagcaggtcgccgccggtttcgtgcggctgtggcgcgagggg
cgttctgcgcccgaagtgctgtcggatgcggtcacgcccgtcgcttcggccccgcgtgaa
cgcggggaattcgggccttcggtctggttctcgctttctgttggccataccggacgggcg
gaagcgcgttggttgctgcccaaggtgtgcgaacagggcgggatcaccaaggacgggatc
ggcgcgatccgtgtgcagcaggaagaaaccttcatccagatcgccgatcaggtcgcaggg
cgcttcccgcaatcggtcgagatcgaacccggtctggtgctgacgcgtctggcgggtgaa
ccgtcgatggaacgcgcggaacgccccgcctatggcgcgggcaagcccgaacgccgcgcg
cctgcgccgcgtgcgccgcgcgaggaccgtcccgcccgcgaagagcgtgcgccgcgtgac
gatcgtccggcttacgtgcccaagcctgcgcgtgtggtcgaggaaggctcgggctggtcg
cccgccgacaacgccccgtccgccgaggctccggccgagaaaaagccctatgctccgcgc
gctgcttacggcgagaagaagccttacgagaaaaaggcttacgctccgcgtgacggtgcc
gcgccgcgcccggcctatggcgagaaaaagccctatgccccgcgtgagggtggcgaacgg
tcgtcggccccgcgtccggcctatggcgagaaaaagccctatgcaccgcgcgacgggggc
gacaagccgtcctatgcgccgcgtgcggcttacggggacaagaagccctatgcgccgcgt
gccgcaggggctgagggtgacgacaagaaaccgcgctggaaggccgagaccggcaaatcg
gcagggttcaaatcgcatggcgggccggaaggcgctggccgtgcggcagggtcgaaatcg
catggcgacaaaccgtcctatgcgccgcgtggcgacggtccggcaaagccgcgtggcgaa
tgggcgggcaaatcggatgccaagcccgcctaccgtggcaagtccgaaggcagcgccgat
gcgcggccgttcaagggcaagtccgattttggcgccaagcctgcctttggcaagcctgcg
ggggccaagccctttggcgcaaggccgaagcccgcggcaccgcgtgcggatgccaaggac
acgtccaaacgctttgtgccgccgaagaagaagtga
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