Paragemmobacter aquarius: HYN69_02065
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Entry
HYN69_02065 CDS
T05407
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
geh
Paragemmobacter aquarius
Pathway
geh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
geh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HYN69_02065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
geh03021
]
HYN69_02065
03400 DNA repair and recombination proteins [BR:
geh03400
]
HYN69_02065
Enzymes [BR:
geh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HYN69_02065
Transcription machinery [BR:
geh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HYN69_02065
DNA repair and recombination proteins [BR:
geh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HYN69_02065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AWB47455
UniProt:
A0A2S0UI43
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All DBs
Position
426714..427730
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWQELIKPTQLVVRPGADPVRVATVIAEPLERGFGLTLGNALRRVLMSSLQGGAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVSLKMEVEGPKRLSISAKGPGVVTAGDISE
SNGIEVLNKDHVICHLDDGADVFMELTVNTGKGYVAADKNKPEDAPIGLIAIDAIFSPVK
KVSYEVTPTREGQVLDYDKLTMKIETNGALTPEDAVAYAARILQDQLSIFVNFDEPESAK
LGEVDAGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMEVEDWPPENIEDLAKRFEDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaactggcaagaactcatcaagcccacgcaattggtggtgcgccccggc
gccgatccggtgcgcgtggcgaccgtgatcgccgaaccgctcgagcggggcttcggcctc
acgctgggcaacgcgctgcggcgcgtgctgatgtcgtcgctgcaaggcggcgcgatcacg
agcgtgcagatcgacaacgtcctgcacgagttctcgtcggtcgccggtgtgcgtgaagac
gtcaccgacatcgtgctgaacctcaagggcgtcagcttgaagatggaagtcgaagggccc
aagcgcctgtcgatctcggccaagggtccgggcgtcgtcaccgctggcgacatttccgaa
tcgaacggcatcgaggttctgaacaaagaccacgtgatctgccatctcgacgacggcgcc
gatgtgttcatggaactgaccgtgaacaccggcaaaggttatgtcgccgccgacaagaac
aagcccgaagatgcaccgatcggccttatcgccatcgacgccatcttctcgccggtcaag
aaagtcagctacgaagtcaccccgacccgcgaaggtcaggttctcgactatgacaaactg
accatgaagatcgaaaccaacggcgcgctgacccccgaagacgccgtggcctatgccgcg
cgcatcctgcaggaccagctgtcgatcttcgtcaacttcgacgaacccgaatcggccaag
ctgggcgaagtcgacgcagggctggaattcaatccgctcctgctcaagaaagtcgacgag
ctggagctttcggtccgttcggcgaactgcctgaagaatgacaatatcgtctacatcggc
gacctgatccagaaaaccgaagccgagatgctccgcaccccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtgctttcgggcatgggcctgcatctcgggatggaagtcgaa
gactggccgccggaaaacatcgaagatctggccaagcgattcgaagaccagttctaa
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