Paragemmobacter aquarius: HYN69_03975
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Entry
HYN69_03975 CDS
T05407
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
geh
Paragemmobacter aquarius
Brite
KEGG Orthology (KO) [BR:
geh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
geh03016
]
HYN69_03975 (thpR)
Enzymes [BR:
geh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HYN69_03975 (thpR)
Transfer RNA biogenesis [BR:
geh03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HYN69_03975 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AWB47774
UniProt:
A0A2S0UIY0
LinkDB
All DBs
Position
817784..818323
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AA seq
179 aa
AA seq
DB search
MMRVFLALPLPDEVLSALRVQQFLLPLPSAVEPEGFHLTLVFLGEVQDRELEAAHERFAE
CRVAPFELRLQGLGLFGGAKPRAAWAGVAASEALARLQGKLEHAARASGIAVERRKFVPH
VTLGRFSPPMPDEAARLEKAVALGGGFVSAPWRVDRFCLYQSHLSHKGARYDELFAYAL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgggtgtttctggcgctgcccttgccggacgaggtgctgtcggcgctgcgggtg
cagcagtttttgctgcccttgccatcggcggtggagcctgaggggtttcacctgacgctg
gtctttctgggcgaggtgcaggatcgggagcttgaggccgcgcatgagcggtttgccgaa
tgtcgcgtggcgccgttcgagttgcgtttgcaggggttggggctgttcggcggggccaag
ccacgggcggcttgggcgggggtggcggcctcggaagccttggcgcggttgcagggcaag
ctggaacatgcggcgcgggcatcggggattgcggtggagcgcaggaagttcgtgccgcat
gtgacgctggggcggttttcgccgcccatgccggatgaagctgcgcggctggagaaggcg
gtggctttggggggcgggtttgtgagcgcgccttggcgggtggatcggttttgcctgtat
cagtcgcatctttcccacaagggcgcgcgctatgacgagttgttcgcctatgctttatag
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