Paragemmobacter aquarius: HYN69_04150
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Entry
HYN69_04150 CDS
T05407
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
geh
Paragemmobacter aquarius
Pathway
geh03410
Base excision repair
geh03430
Mismatch repair
geh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
geh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HYN69_04150 (recJ)
03430 Mismatch repair
HYN69_04150 (recJ)
03440 Homologous recombination
HYN69_04150 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
geh03400
]
HYN69_04150 (recJ)
DNA repair and recombination proteins [BR:
geh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HYN69_04150 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HYN69_04150 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HYN69_04150 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
GapR_DNA-bd
DUF7281
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
AWB47809
UniProt:
A0A2S0UJ17
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All DBs
Position
855619..857370
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AA seq
583 aa
AA seq
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MTGRAFLNVEASLTGRRWIGPSEDEARLAEAMAQQTRLPMALCHTLVKRGVAPADAAAYL
APALRDLLPDPLSLRDMAKAAARFLAALKARQRVAVFADYDVDGGTSAALVILWLRAMGH
DATLYIPDRIDEGYGPNVPAMRALAGTHDLVICVDCGTLSHEPIAAAVAAGADVVVLDHH
LGADTLPPALAVVNPNRQDEDGALGHLCAASVVFLMLVEANRLLRGEGVTGPDLMGMLDL
VALATVADVAPLVGVNRALVRQGLKVMARRERVGLRALADISRLDTAPTCHSLGFLLGPR
VNAGGRIGQADLGARLLCCGDEHEAKALAERLDELNTERRDIEARVREEAMAQAEARGFD
APLVWAAAEGWHPGVVGIVASRLKEATNRPAIVIGFEGGIGKGSGRSVSGVDLGASIHRL
AEEGLLVKGGGHRMAAGLTVAQDKVEAAMARLSELLARQGAGAGGPADLKLDGLLMPSGA
DLALVERLEEAGPFGASSPAPRFAFADMAVTARRIGESHLRLTIKDGMGGSLEGVAFGAF
DTALGPALFEGGHTRFHIAGRLELNTWNGRTKVQLRVEDAARA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgacgggacgcgcttttctgaatgtcgaagcctcgctgaccggacgccgctggatcggc
ccgtccgaggatgaggcgcgtctggccgaggccatggcgcagcagacgcgccttccgatg
gcgctgtgtcatacgctggtcaagcgcggggtagcacctgccgatgcggcggcctatctg
gcgcccgcgctgcgcgatcttttgccggacccgctgtcgttgcgcgatatggccaaggct
gcggcgcggtttctcgcggcgctgaaggcgcggcaaagggttgccgtctttgccgattac
gatgtcgacgggggcacttcggctgctttggtgatcctgtggctgcgggcgatggggcat
gatgccacgctgtatatccctgaccggatcgatgaggggtatggtccgaacgtgcctgcg
atgcgggcgcttgcggggacgcatgatctggtcatctgcgtcgattgcggcaccctttcg
catgaaccgattgccgccgccgtggctgcgggggcggatgtggtggtgctggaccatcac
cttggcgccgacacgctgccgcccgctttggccgtggtgaaccccaaccggcaggacgag
gatggcgcgctgggccatttatgcgcggcctcggtggtgtttttgatgctggtcgaggcc
aaccggctgttgcggggcgagggcgtgacggggcctgacctgatggggatgctcgatctg
gtggcgctggcgacggtggcggatgtggcgccgttggtcggggtgaaccgggcgctggtg
cggcaagggcttaaggtgatggcgcggcgcgagcgcgtggggttgcgggcgctggccgat
atctcgcggctcgacactgcgccgacctgccattcgctggggtttctactgggtccgcgg
gtcaatgcaggcgggcggatcgggcaggcggatctgggcgcgcggcttttgtgctgcggc
gacgagcacgaggccaaggcgctggccgagcggctggacgagttgaacaccgagcgccgc
gatatcgaggcccgcgtgcgcgaggaagccatggcgcaggccgaagcgcggggctttgat
gcgcccttggtctgggcggcggccgaggggtggcaccccggtgtcgtcggcatcgtcgcg
agccgcctgaaagaggcgacgaaccgccccgcgattgtcatcgggttcgaaggcggcatc
ggcaaagggtcggggcgatcggtttccggtgtcgatctgggcgcgtcgatccaccggctg
gccgaggaggggttgctggtcaagggcggcgggcaccgcatggcggcagggctgaccgtg
gcgcaagacaaggtggaggccgcgatggcgcgcctgtcggaattgcttgcccgtcagggt
gcgggggcaggcgggcctgcggacctgaagcttgacgggttgttgatgccttccggcgca
gaccttgcgctggtcgagcggttggaggaggccggaccctttggcgcatcgtcgcccgcg
ccgcgctttgcctttgccgacatggcagtgactgcgcgtcgcatcggcgaaagccacctg
cggctgacgatcaaggacggcatgggcgggagccttgaaggggtggccttcggggcgttc
gatacggcgcttgggcctgcgctgttcgagggggggcatacccggtttcacattgccggg
cggctggagttgaacacctggaacggccggaccaaggtgcagttgcgcgtcgaggacgcc
gcccgcgcctga
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