KEGG   Paragemmobacter aquarius: HYN69_12615
Entry
HYN69_12615       CDS       T05407                                 
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
geh  Paragemmobacter aquarius
Pathway
geh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:geh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HYN69_12615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:geh03400]
    HYN69_12615
DNA repair and recombination proteins [BR:geh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HYN69_12615
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HYN69_12615
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H DUF87 AAA_19 AAA_22 TrwB_AAD_bind AAA AAA_16 Kinesin
Other DBs
NCBI-ProteinID: AWB49235
UniProt: A0A2S0UN60
LinkDB
Position
2615991..2618171
AA seq 726 aa
MPHNNINAVSERPEVLTRPKLEGGRAFVLASSFEPAGDQPTAIAELSAGVRSGERDQVLL
GATGTGKTFTMAKIIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQP
EAYVPRSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYSAMT
QDLIVGQNYDQRQMMAELVAQQYRRNDAAFARGSFRVRGDSLEVWPAHLEDRAWRFSFFG
DELESIVEFDPLTGAKSDDFKQIRIYANSHYVTPRPTMAQAIKGIKDELFHRLKQLTGEG
KLLEAQRLEQRTQFDLEMLEATGVCNGIENYSRYLTGRSPGEPPPTLFEFIPDNAIVFAD
ESHVSVPQIGGMYKGDFRRKMTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAA
WELEQTGGVFTEQVIRPTGLIDPQVEIRPVDMQVDDLLEEIRRVAARGLRVLVTTLTKRM
AEDLTEYFHEQGIRIRYMHSDIDTIERIEILRDLRLGAFDVLVGINLLREGLDIPECGLV
AILDADKEGFLRSETSLIQTIGRAARNSEGRVIMYADRITGSMERAMAETNRRREKQIAY
NTLHGITPTTIRKNVEDVLSGLWNGDTDMARVTARVDKPMVGQNLSAHLDALRLQMRKAA
ENLEFEEAARLRDEVKRLEAVELTISDDPMARQSVVEEAAEAAVKSSGRSTAGRAGQRGG
TKRRGR
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgccccacaacaacatcaacgccgtcagcgaacgccccgaggttctgacccgccccaaa
ctggaaggcggccgcgccttcgtgctcgcctccagcttcgaaccggcgggcgaccagccc
accgcgattgccgagctttcggccggtgtgcggtcgggcgaacgcgatcaggtgcttctg
ggggccaccggcaccggcaagaccttcaccatggccaagatcatcgaagaaacccagcgt
cccgcgatcatcctcgcgccgaacaagacgctggcggcccagctatacggcgaattcaaa
ggcttcttccccgacaacgccgtcgaatacttcgtctcctactacgactactaccagccc
gaggcttacgtgccgcgctcggacacctacatagaaaaagaatcccagatcaacgagcag
atcgaccggatgcgccactcggccactcgcgccctgctggaacgcgacgatgtaatcatc
gtggcctccgtctcctgcatctacggtatcggctcggtcgaaacctactcggccatgacg
caagacctgatcgtcgggcaaaactacgaccagcgccagatgatggccgagcttgtcgcc
cagcaataccgccgcaacgacgccgcctttgcccgtggcagcttccgcgtgcgcggcgac
agcctcgaagtctggcccgcccacttggaggaccgcgcatggcgcttttccttctttggc
gacgaactcgaatccatcgtcgaattcgacccgctgaccggtgccaaatccgatgatttc
aaacagatccgcatctacgccaacagccactacgtcacgccacgcccgaccatggcgcaa
gcgataaagggcatcaaagacgagcttttccaccgcctcaagcaactcaccggcgaaggc
aaactgctcgaagcgcaacggctcgaacagcgcacgcaattcgacctcgaaatgctcgaa
gccaccggcgtctgcaacggcatcgagaactactcgcgctacctcaccggccgctccccc
ggcgagccgccgccgacgcttttcgaattcatccccgacaatgccattgtctttgccgac
gaatcccacgtgtccgtcccgcagatcggcggcatgtacaagggcgacttccggcgcaag
atgacccttgccgaacacggcttccgcctgccctcctgcatggacaaccgcccgctgaag
ttcgaggaatgggacgccatgcgcccgcaatcggtcttcgtgtcagccacccccgcggcg
tgggagctggaacagaccggcggcgtgttcaccgaacaggtgatccgccccaccggcctg
atcgacccgcaggtcgaaatccgccccgtcgacatgcaggtcgatgacctcttggaagaa
atccgccgcgtcgccgcccgtgggctgcgcgtccttgtcaccacgctcaccaaacgcatg
gccgaagacctgaccgaatatttccacgaacagggcatccgcatccgctacatgcactcg
gatatcgacaccatcgaacgcatcgaaatcctgcgcgacctgcgccttggcgccttcgac
gttctggtgggcatcaacctgctgcgcgaagggctcgacatccccgaatgcggcctcgtg
gccattctggatgccgacaaggaaggcttcctgcgctcggaaacctcgctcatccagacc
atcggccgcgccgcccgcaatagcgaaggccgcgtcatcatgtatgccgaccgcatcacc
ggcagcatggaacgcgccatggccgaaaccaaccgccgccgcgaaaagcagatcgcctat
aacacgctccacggcatcacccccaccacgatccgcaagaacgtcgaagacgtgctctcg
ggcctgtggaacggcgataccgatatggcccgcgtcacggcccgcgtcgacaaacccatg
gttggccagaacctctcggcccatctcgacgcgctgcgcctgcaaatgcgcaaagccgcc
gaaaatctcgaattcgaggaagccgcccgcctgcgggatgaggtgaagcgcctcgaagcc
gtcgaactcaccatttccgacgaccctatggcgcggcaatcggtggtggaagaagccgcc
gaagcggcggtcaaatcctcgggccgctcgaccgcaggccgcgccggccagcgcggcggc
accaaacggcgtggacgttga

DBGET integrated database retrieval system