Paragemmobacter aquarius: HYN69_15180
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Entry
HYN69_15180 CDS
T05407
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
geh
Paragemmobacter aquarius
Pathway
geh02020
Two-component system
geh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
geh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HYN69_15180
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HYN69_15180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
geh03000
]
HYN69_15180
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
geh02035
]
HYN69_15180
Transcription factors [BR:
geh03000
]
Prokaryotic type
Helix-turn-helix
Other families
HYN69_15180
Bacterial motility proteins [BR:
geh02035
]
Flagellar system
Flagellar assembly proteins
Others
HYN69_15180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_2
HTH_50
T2SSE
AAA
AAA_3
IstB_IS21
HTH_31
AAA_19
AAA_30
HTH_29
AAA_18
RNA12
Motif
Other DBs
NCBI-ProteinID:
AWB49663
UniProt:
A0A2S0UPC8
LinkDB
All DBs
Position
3150084..3151184
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AA seq
366 aa
AA seq
DB search
MTSEWINRQVAARALPVSADAIDRIITGESAPIRQLKRMIAAVAVSDASVVVTGPTGSGK
ELVAEALHRASGRSGPLVAVNCAAIPAELLESELFGHEKGAFTGADRARTGRIEQAAGGT
LFLDEIGDMPLALQAKLLRVLESRRIQRLGSNSDIPVNFRLVTATHRDLSQSIEQGQFRA
DLFYRINVFTLTVPSLAERTCDIPLILARMISDQMCQNPAADSPHFDVSAIRALCAYPWP
GNVRELKNVLHRAFVMLPGRMVTARHVRDNLLGMAMPDLSDQGCDLPEPAPLSGDMPDPA
GIQTAFGKLGDIDMRGYIRDIEVAMIEAALDKRVGNVAQAADMLRLRRTTLIEKMKKYGI
RRGLDA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgagtggattaacagacaggttgcagcgcgtgcgctccccgtttcggccgat
gcgatcgaccgtatcatcacgggcgagtccgccccgatccgccagttgaagcgcatgatc
gctgccgtcgccgtcagtgacgcctctgtcgtcgtgaccggcccaacggggtcgggcaag
gaactggttgccgaagccctgcaccgcgcctcgggccgttcgggcccgctggttgcggtg
aactgcgccgccatccccgccgagcttctggaaagcgagcttttcggccacgagaagggc
gctttcaccggcgccgaccgtgcccgcaccggccgcatcgaacaggccgccggcggcacg
ttgttcctcgatgaaatcggcgacatgcccttggcattgcaggcaaaacttctgcgcgtc
ctcgaaagccgccgtatccagcgcctcggttcgaacagcgatattccggtcaatttccgc
ctcgtcaccgcaacccaccgcgatctgtcgcagtcgatcgaacagggccagttccgcgcc
gacctgttctaccgcatcaacgtcttcacgctgacggtccctagcctcgcggaacgcacc
tgcgacatcccgctcatcctcgcacggatgatctcggaccagatgtgccagaaccccgct
gccgactcgccgcacttcgacgtttcggcgatccgggcgctctgcgcctatccctggccc
ggcaacgtgcgcgagctgaaaaacgtgctccaccgcgccttcgtcatgctgccggggcgc
atggtcaccgcccgccatgtgcgtgacaaccttctgggcatggccatgcccgacctgtcg
gaccagggatgcgacctgcccgaacccgcacccctgtcgggcgacatgcccgatccggct
ggcatacagaccgcctttggcaaactcggcgacatcgatatgcgcggctatatccgcgac
atcgaagtggcgatgatcgaagcggcgctcgacaagcgggtcggcaacgtggcgcaagcc
gccgacatgctgcgtctgcgccgcaccacactgatcgagaagatgaagaaatatggcatc
cgccgcgggctggacgcgtaa
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integrated database retrieval system
