Paragemmobacter aquarius: HYN69_16480
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Entry
HYN69_16480 CDS
T05407
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
geh
Paragemmobacter aquarius
Pathway
geh00521
Streptomycin biosynthesis
geh00523
Polyketide sugar unit biosynthesis
geh00541
Biosynthesis of various nucleotide sugars
geh01100
Metabolic pathways
geh01110
Biosynthesis of secondary metabolites
geh01250
Biosynthesis of nucleotide sugars
Module
geh_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
geh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HYN69_16480 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HYN69_16480 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HYN69_16480 (rfbC)
Enzymes [BR:
geh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HYN69_16480 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
DUF2442
Motif
Other DBs
NCBI-ProteinID:
AWB49889
UniProt:
A0A2S0UPZ0
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All DBs
Position
3401498..3402052
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AA seq
184 aa
AA seq
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MQIDTTALQGVLVLTPRRFGDARGWFVETFNAGRMAEAGIDIGFVQDNHSFSTTKGTLRG
LHYQKPPRAQDKLVRCSQGAILDVAVDARAGSATYGHWVGVELTAENGRQLLVPKGFLHG
FVTLTDNTEVQYKCSDVYAPDCDGGVHWDSLGIDWGVTDPVLSDKDRIAPAFADWQSPFA
GGAL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcgatacaaccgcgctgcaaggcgtgcttgtcctgaccccccgccgctttggc
gatgcgcggggctggttcgtcgaaaccttcaacgccggtcgcatggccgaagcgggcatc
gacatcggtttcgtgcaggacaaccattccttctcgaccaccaagggcaccttgcgcggg
ctgcactaccagaaaccgccccgcgcacaggacaagctggtacgctgctcgcaaggcgcg
atcctcgacgtcgcggtcgatgcacgggcggggtctgccacctacggccattgggtcggg
gtcgaactgacggccgaaaacgggcggcaactcctcgtgcccaaggggttcctgcacggc
ttcgtcaccctgaccgacaacaccgaggtgcagtacaaatgctcggacgtttacgcgccc
gactgtgacggcggcgtgcactgggattcgctgggcatcgactggggcgtgaccgaccct
gtgctgtccgacaaggaccgcattgcccccgcctttgccgattggcaatcgcccttcgca
gggggtgcactatga
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