Paragemmobacter aquarius: HYN69_16485
Help
Entry
HYN69_16485 CDS
T05407
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
geh
Paragemmobacter aquarius
Pathway
geh00521
Streptomycin biosynthesis
geh00523
Polyketide sugar unit biosynthesis
geh00525
Acarbose and validamycin biosynthesis
geh00541
Biosynthesis of various nucleotide sugars
geh01100
Metabolic pathways
geh01110
Biosynthesis of secondary metabolites
geh01250
Biosynthesis of nucleotide sugars
Module
geh_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
geh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HYN69_16485 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HYN69_16485 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HYN69_16485 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HYN69_16485 (rfbB)
00525 Acarbose and validamycin biosynthesis
HYN69_16485 (rfbB)
Enzymes [BR:
geh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HYN69_16485 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
NmrA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AWB49890
UniProt:
A0A2S0UQ50
LinkDB
All DBs
Position
3402049..3403089
Genome browser
AA seq
346 aa
AA seq
DB search
MKILVTGGAGFIGSAVVRLAVARGHAVVNLDALTYAACLDNVKSVGNSPLYAFEHADIRD
RAALDRVLAQHRPDAIMHLAAESHVDRSIDGPGDFVQTNVNGTFNLLEAARAYWVREGRP
ETFRFHHISTDEVFGTLGATGKFTEDTPYAPNSPYSATKAASDHLVRAWHETYGLPVVMT
NCSNNYGPFHFPEKLVPVVILNALAGKPIPVYGTGENVRDWLYVEDHADALLTVLTRGTI
GRSYNIGGENEARNIDLVRIICALLDEMRPQGAPHDRLITFVADRPGHDLRYAIDPARIT
AELGWRPSVTVEEGLRRTVRWYLDNAPWWQALQDRAGVGQRLGVKA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttgtcaccggaggcgcgggtttcatcgggtccgccgtggtgcgtctggcc
gtggcgcgggggcatgcggtcgtcaaccttgatgcgctgacctatgcggcctgcctcgac
aacgtcaaatcggtgggcaattcgccgctctacgcattcgaacacgccgacatccgcgac
cgcgcagcactcgaccgcgtgttggcgcagcaccgccccgatgcgatcatgcatctggct
gccgaaagccatgtcgaccggtcgatcgacgggccgggcgatttcgtgcagaccaacgtc
aacggcaccttcaacctgctcgaagccgcccgcgcctattgggtgcgcgaaggccgcccc
gaaaccttccgcttccaccacatctcgaccgacgaggtgttcggaacgctcggcgcgacc
ggcaagttcaccgaagacacgccctatgcccccaacagcccctattccgcgaccaaggcg
gcaagcgaccatctggtccgtgcatggcatgaaacctatggcctgccggtggtgatgacc
aattgctcgaacaattacggccccttccacttccccgaaaaactcgtaccggtcgtcatc
ctgaacgccttggccggcaaacccattccggtctacggcacgggcgagaatgtgcgcgac
tggctttacgtcgaagaccatgccgacgcgctgctgaccgttctgacacgcggcaccatc
ggccgcagctacaacatcggcggcgagaacgaggcccgcaacatcgaccttgtccgcatc
atctgcgcgctgctcgatgaaatgagaccccaaggcgccccccatgaccggctgatcacc
tttgtcgccgaccgccccggccatgacctgcgctacgcgatcgaccccgcccgcatcacc
gccgaactgggctggcgcccgtcggtcacggtcgaggagggcctgcgccgcacggtgcgc
tggtatctcgacaacgcgccctggtggcaggccctgcaagaccgcgcaggggtaggccag
cggctgggggttaaggcatga
DBGET
integrated database retrieval system