Paragemmobacter aquarius: HYN69_17455
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Entry
HYN69_17455 CDS
T05407
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
geh
Paragemmobacter aquarius
Pathway
geh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
geh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYN69_17455 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
geh03021
]
HYN69_17455 (rho)
03019 Messenger RNA biogenesis [BR:
geh03019
]
HYN69_17455 (rho)
Transcription machinery [BR:
geh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HYN69_17455 (rho)
Messenger RNA biogenesis [BR:
geh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HYN69_17455 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
S1CSD-TOTE-2
NACHT
AAA_22
OB_RNB
ATPase_2
AAA
Motif
Other DBs
NCBI-ProteinID:
AWB50486
UniProt:
A0A2S0URN9
LinkDB
All DBs
Position
3605345..3606622
Genome browser
AA seq
425 aa
AA seq
DB search
MTETIERLNLSDLKAKTPADLLAMAEEWEIENAPSMRKGEMMFQILKEHAEDGFEIGGDG
VLEVLQDGFGFLRSPEANYLPGPDDIYVSPEMIRQFSLRTGDTIEGVIQAPREAERYFSL
VKATKINFDDPERARHKVHFDNLTPLYPDERLKMEIEDPTIRDRSARIIDLVCPIGKGQR
ALIVAPPRTGKTVLLQNIAHSVATNHPECYLIVLLIDERPEEVTDMQRSVRGEVVSSTFD
EPATRHVAVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANA
LQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKR
VFPAIDILKSGTRKEDLLVDKIDLQKTYVLRRILNPMGTTDAIEFLIGKLKQTKSNSEFF
DSMNS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaacgatcgaacgtttgaacctttccgacctcaaggccaagacgcccgcggat
ttgctggcgatggccgaggaatgggagatcgagaacgcgccctcgatgcgtaagggcgag
atgatgttccagatcctgaaggaacatgccgaggacgggttcgaaatcggtggcgacggt
gtgcttgaggtgcttcaggacgggttcggtttcctgcggtcgccggaagcgaattatctg
cccggtccggatgatatttacgtcagccccgagatgatccggcagttttcgctgcggacg
ggggatacgatcgagggtgtgattcaggcgccgcgcgaggccgagcggtatttttcgctg
gtcaaggcgacgaagatcaatttcgacgatcccgagcgggcgcgccacaaggtacacttt
gacaacctgacgccgctttatcccgacgagcggttgaagatggagatcgaagatccgacg
atacgggaccgttcggcccggattatcgatctggtttgcccgatcggtaaaggccagcgc
gccctgatcgtggcaccgccgcggacgggtaagacggtgcttttgcagaatatcgcgcat
tcggtggcgaccaatcaccccgagtgttacctgatcgtgctgctgatcgacgaacgaccc
gaggaagtgaccgacatgcagcggtcggtgcgtggcgaggtggtttcttcgacatttgac
gaacctgcgacgcggcacgtggcggtggccgagatggtgatcgaaaaggccaagcgtctg
gtcgagcacaagcgcgatgtcgtgatcttgctcgattcgatcacgcgtctgggtcgggcg
ttcaacacggtggtgccgtcgtcgggcaaggttctgaccggtggtgtggatgcgaacgcc
ttgcagcggccgaagcggttttttggtgcggcgcggaatatcgaagagggcgggtcgctg
accattatcgccacggcgctgatcgataccggtagccggatggacgaggtgattttcgaa
gaattcaaaggtacgggtaacagcgagatcgtgctggaccgcaaggttgcggacaagcgc
gtgttcccggcgatcgacattctgaagtcgggcacgcggaaggaagatttgctggtcgac
aagatcgatctgcagaagacctatgtgttgcggcggatcttgaatccgatgggaacgacc
gatgccatcgagttcctgattggcaagctgaagcagaccaagagcaacagcgaattcttc
gattcaatgaatagctga
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